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Hi Pawel-
Since the Nifti format cannot hold information about time frames or the tracer and many modelling software needs that information, would it be possible to create a BIDS sidecar or a SIF fil…
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@dvm-shlee and @gdevenyi
I pulled the current master to take advantage of the fixes implemented in #96 but I cannot convert using `bids_convert` and the -j option. I get:
```
(brkraw038_20221…
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Hi,
Looks like `pydicom` is looking for `LossyImageCompressionRatio` attribute when using MOOSE segmentation as input.
I am using nifti2dicom 1.1.3 with [patched sms 3D](https://github.com/LalithS…
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**Describe the bug**
When downloading an atlas, I sometimes wish to view the reference and annotation in ITKsnap. This is likely the most popular software for interacting with atlases. The reference …
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I am encountering an error while attempting to run a model using Docker and command-line tools. Below is the Docker command used:
``` bash
docker run \
--rm \
-v $INPUT_FILE:/path/to/nif…
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Hi,
Does the current version of Neuroglancer support NIfTI file format? If so, do you have a working example on how to specify source url and associated template json file(s) to use? e.g.) info
…
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Just reporting it, because I cannot immediately explain it to myself:
`@graph.records.prov:Entity` contains records on parameter estimate maps like:
```json
{
"@id": "htt…
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Develop a subset importer for Glue from medical imaging formats. Also, whether they are DICOM-SEG or Nifti files, medical imaging files can have multiple "subsets" (in Glue terminology) stored inside …
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for non-DICOM datasets (such as those from LONI IDA, HCP etc), key properties of MR volumes present only in NIfTI headers but NOT in JSON sidecars e.g., number of volumes, voxel size, image dimensions…
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The NIfTI [specification defines cal_min and cal_max](https://nifti.nimh.nih.gov/pub/dist/src/niftilib/nifti1.h) as follows:
```C
float cal_max; /*!< Max display intensity */ /* float cal_m…