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Sorry in advance for the brain dump here, but I am trying to capture a lot of open tabs. 😂
So, unfortunately, it looks like the 0.4.18 branch, PR #6002 in particular, *did* in fact add files to gi…
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I run REFINE_METROLOGY with MERGE_ANOMALOUS ON and OFF, then MERGE with MERGE_ANOMALOUS ON.
For 2000 images (SAD),
ON: 19.65 sigma
OFF: no signal at all!
CC1/2 and the number of merged lattices wer…
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Dear author,
Hope this email finds you well. My name is Xiyue Wang. I am a current PhD student at Sichuan University, China.
I see your paper "Accurate recognition of colorectal cancer with semi…
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Hello Dr. Mart and team,
I am using the pathology-hooknet-tls tool to identify TLSs and GCs in H&E-stained slides of diagnosed ccRCC samples. Despite following the installation and preprocessing in…
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Hi zoogzog,
I'm wondering why to apply tencrop technique on testing images. I thought data augmentation techniques should only be applied on training set in order to add diversity of training image…
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New histomicstk user here. Trying to add histomicstk modules to an existing image analysis pipeline and running into a dead end in a digital slide archive tutorial. Any solutions/advice would be much …
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I have been trying to adapt `examples/multiclass segmentation (camvid).ipynb` for my imaging context where I have a lot of unannotated pixels annotated with the value 0 in the mask (other than 0 I hav…
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Hi Tiago,
my previously working script to download RNAseq expression data from GDC fails with the error message "`tar: unrecognized archive format`". I tried downloading with `method` set to `client…
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Question
is this program still on maintainance, does it support to transfer itk image to svs format?
or is there any other way to write the itk::TileMergeImageFilter->GetOutput() to svs format
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This work is a part of a master project DS Project @ University of Vienna
- Analyze [CheXpert dataset](https://stanfordmlgroup.github.io/competitions/chexpert/) ([paper](https://arxiv.org/pdf/1901.…