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Hello,
canu software can assemble homologous polyploid genome to get contig, if can, how to set the parameters?
Best wishes
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Hi,
I have a polyploidy genome from plant on which Hi-C experiment was performed.
My question is, does Hi-C pro allows multimapping reads?
The other tools like hicexplorer discard my multima…
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Hi there,
From poking around in Trinity's internals in the past, I'm aware that certain stages produce assembly graph like files. It would be ideal if these files were stored or provided in the .G…
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May be worth looking at how to schedule these on the server by making a repeating job that sets itself going again once complete.
https://stackoverflow.com/questions/18306362/run-r-script-from-comm…
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ID:col10041
page 593
such as " acquired characteristics" , " polyploidy" , " theory of evolution"
please see the attached figure below, the left one is the old version, while the right one is the lat…
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- [x] _A. ricciae_ The problem:
> Something is also wrong with the TE level for A. ricciae in figure 4 and main text, which is much lower than the other bdelloid rotifers – but they show similar le…
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I'm thinking that life stages should mimic some of the simple examples we used in plant ecology this year of monocarpic/semelparous plants. I'll have a go at creating a flowchart to add to the repo.
…
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I notice you say diploid genome in several spots, does this mean this tool will not work for a hexaploid organism like bread wheat?
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Hi Elvira,
Here is our suggestion for a new ECO term to be used for disease annotation. We are trying to encompass cases where the author uses multiple lines of experimental evidence plus background …
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Genotype filter accepts a list of genotypes per sample. Querying multi-allelic genotypes is not always as easy, because there are multiple combinations that depends on the number of secondary alternat…