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> ```
> Attempting to get 0 documents from nmdcschema/activity_set in pages of 200000.
> warning: 400 Client Error: Bad Request for url: https://api.microbiomedata.org/nmdcschema/activity_set?max_pa…
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Hello, I was trying the SYNY using the configs you developed before (including just a few of the scaffolds from the genome), so my command was
run_syny.pl -a *.gz -outdir SUBSET_minimap --aligner…
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**Deliverable this task is associated with**
See Deliverables tab here: https://docs.google.com/spreadsheets/d/1jF1RU_TwQlJpqvHnKk-KieE6VlUv0je4eFddK9idPuE/edit?usp=sharing
**Implementation Sketch*…
aclum updated
10 months ago
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Individual sample page - consider adding: omics processing metadata and sample prep metadata, elevation, environmental package
Related to #448
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@dwinston will provide a Napa-compliant `id` minting endpoint. He is blocked by needing to know what typecode to include in the `id` for an instance of a particular class.
@sujaypatil96 and I have …
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- Data Team Updates for the month of Oct
- BETSY progress
- QC paper: publication progress
- Year 3 setup and planning: setup milestones and meetings
- Biosample submission updates: how/when to submit…
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We need to decide on an appropriate prefix to assign the `FieldResearchSite` objects, specifically in the `id` property when their values are fetched from upstream GOLD biosample records.
The GOLD …
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There is no metadata for seed coat (0 BioProjects, 0 BioSamples) though the count data for seed coat is present.
It would be helpful if this metadata file was updated to support the count data for…
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[`nmdc_schema/class_sparql.py` in branch `issue-1070-content-from-mongo`](https://github.com/microbiomedata/nmdc-schema/blob/issue-1070-content-from-mongo/nmdc_schema/class_sparql.py) can obtain all s…