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Hi there,
I think that there is some bug in the count_fragments_features atac features. The gene activity I created from those are very bad looking. This is issue is separate from the other issue w…
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Sorting by `projectDescription` fails to properly sort all results.
```
$ http 'https://service.azul.data.humancellatlas.org/index/projects?size=30&catalog=dcp37&order=asc&sort=projectDescription&…
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hi, rongxing
when i have installed the package `bedGraphToBigWig`, i found that i can't use it because shared library.
```
$bedGraphToBigWig
bedGraphToBigWig: error while loading shared librar…
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Hey, Author,
I got a warning message "entries of params were nan which will throw error in lstsq"
when I run the test for anndata with code:
test = de.test.two_sample(YO_adata_AT2,grouping='groupi…
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Hi, alex.
Thanks for developing the awesome tool, STAR.
We're trying to execute STAR with our existing single cell RNA-seq. data based on In-Drop platform for better performance.
As you mentioned p…
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Hi, Thank you very much for this amzing work, I was trying to use your pipeline, however seem like the transform_bc.py file is mising from the repository. Could you please let me know how can i get th…
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Hi,
Thank you for this great tool! I have a question about how to merge multiple runs per sample. I have two fastq1 and fastq2 files per sample (four fastq files), I wonder in which step should I m…
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Hi, thank you for developing this tool.
I would like to ask about the interpretation of the read assignments file.
I'm trying IsoQuant version 3.6.1 on single-cell data with the --no_model_constru…
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If only I understood ethercalc source code and know how to code in livescript , here are some features I would love to see / implemented
1. Those lock/unlock cell button , when a user clicks the lock…
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Hi, The manual says that bamRemoveDuplicatesType only applies to:
"string: mark duplicates in the BAM file, for now only works with (i) sorted
BAM fed with inputBAMfile, and (ii) for paired-end alig…
gevro updated
2 years ago