-
### Background
**In a nutshell:** ImageJ (https://imagej.net/) is a software for manipulating images (2D, 3D = 2D stacks, time series, roughly operation with RGB matrices). VCell (http://vcell.org…
-
Hi CellPose team,
I recently came across this program when I ran into some tough segmentation problems and overall it has worked amazingly (better than many of the other available programs)! I tra…
-
Hello! Just came across this fantastic project, and found it extremely relevant for a variety of my projects.
We wish to use DSA to be able to visualize the WSIs that lie on a server, but I was sur…
-
Ultimately, we will likely use a convolution-based particle detection approach to find cells of interest for follow-up imaging. It would be nice to develop a Python or C++ equivalent of a common func…
-
Hi!
I'm a complete beginner at Python but find the software really exciting, so have jumped in at the deep end! I'm still familiarising myself with the pipeline in 3D using the demo 3D model and …
-
Some JAR files are present on the Fiji update site and hence available in the Fiji user distribution, but _not_ copied into the Fiji source build's `jars` folder because nothing in `src-plugins` actua…
-
where can I download the pre-trained models for Stardist? Thanks,
-
Hi there!
Really appreciate you put much effort in building ImPartial!
I want to try out ImPartial on my digital pathology data, especially want to use the interactive annotation feature. Is this…
hw-ju updated
2 years ago
-
Opening an n5 dataset of one (or multiple) very large 3D tile(s) in BDV (open xml/hdf5) or BigStitcher, the displayed image shows striped artefacts and/or disintegrate (rectangular pieces misplaced), …
-
Dear developper, I was wondering if there is a way to extract the density of labelling from the analysis ? I have two conditions to analyse where the directionality and the density change. Maybe it i…