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MouseLand
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cellpose
a generalist algorithm for cellular segmentation with human-in-the-loop capabilities
https://www.cellpose.org/
BSD 3-Clause "New" or "Revised" License
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[BUG] GUI diameter is reset to 30 when training own model
#963
manerotoni
closed
1 week ago
3
[BUG]
#962
Voidext
opened
1 week ago
0
BUG in drawing the areas
#961
Anto9393
opened
1 week ago
0
cell membrane protein segmentation
#960
arindampal10629
opened
1 week ago
0
Backwards compatibility of Cellpose 3 with models trained in Cellpose 2?
#959
StevenBackues
opened
1 week ago
0
[BUG]
#958
TAN-epic
opened
1 week ago
0
Cellpose not making full use of GPU
#957
KandlerJ
opened
2 weeks ago
0
[FEATURE] Package Cellpose models for BioImage.IO model zoo
#956
qin-yu
opened
3 weeks ago
2
Added scrollable right side menu to match left side menu width
#955
ShalinGhe
closed
3 weeks ago
0
[BUG] OOM overflow error
#954
jeskowagner
closed
3 weeks ago
0
How to use OpenVINO backend for Cellpose cyto2
#953
pvardanis
closed
2 weeks ago
1
running in a non internet environment
#952
EricDeveaud
opened
3 weeks ago
2
Can't train cellpose using mask
#951
ianmanifacier
opened
4 weeks ago
1
HTTP Error 500: INTERNAL SERVER ERROR
#950
Shrishtee-kandoi
opened
1 month ago
0
allows --all channels to work in CLI
#949
lacan
opened
1 month ago
0
get mask from flow-maps
#948
phisanti
opened
1 month ago
0
[BUG] No masks found after training
#947
jzeng22
opened
1 month ago
6
Segmentation Fault when Cellpose is not First Import on M3 Mac [BUG]
#946
bennm37
opened
1 month ago
1
[FEATURE] Extracting information from original image using Cellpose masks
#945
sakethkar
opened
1 month ago
0
[BUG] Internal Server Error on cellpose.org
#944
hieliz
closed
1 month ago
1
Code quality standards
#943
JoshuaSchlucke
opened
1 month ago
1
Need help training models/ draw ROI bug
#942
cllopez4
opened
1 month ago
0
Help segmenting bright field images
#941
Bassetyabrag
closed
1 month ago
2
[BUG] TypeError: 'NoneType' object is not subscriptable
#940
ZZQ-dev
closed
1 month ago
1
[BUG]: Segmentation fault on mac M1
#939
ElpadoCan
closed
1 month ago
1
Bugfix: Resizing masks containing over 65,535 cells not supported by OpenCV
#938
Tobiaspk
opened
1 month ago
1
[BUG] OpenCV does not support resizing of uint32 data types during model evaluation
#937
Tobiaspk
opened
1 month ago
0
[FEATURE]Request for Data Processing and Training Code of Cellpose3
#936
smacaijicoder
closed
1 month ago
1
[Question] Scaling of cellprob and flows
#935
FrickTobias
closed
1 month ago
2
[BUG] "ERROR: no image in npy" after saving with masks_flows_to_seg
#934
SamHawkens2
closed
1 month ago
6
Memory issue using cellpose for TMA ome.tiff
#933
Mona-Khorani
opened
1 month ago
6
fix mask_flows_to_seg to work for multiple inputs
#932
mrariden
closed
1 month ago
1
is the server down?
#931
Bassetyabrag
closed
1 month ago
2
CellposeGUI Stuck on Draw Masks [BUG]
#930
mayishazn
opened
1 month ago
10
[INSTALL] "OSError: could not get source code" with GUI
#929
mayishazn
opened
1 month ago
1
Runtime Error [BUG]
#928
mayishazn
opened
1 month ago
2
[FEATURE] - better documentation of and/or integration for use with training-run-tracking tools
#927
bethac07
opened
1 month ago
1
[INSTALL] Could not load the Qt platform plugin "xcb" in "" even though it was found.
#926
brchn6
opened
1 month ago
1
[BUG] After training model with cellpose 3 the diameter is reset to 30
#925
MARGINMB
closed
1 month ago
2
Training argument --save_each not working using Cellpose 3
#924
dfgdgdfgd
opened
2 months ago
2
[INSTALL]How to call the model trained by GUI on my own data set in code？
#923
Gh19950825
opened
2 months ago
0
[BUG] Model zoo (cyto2) not available in cellpose GUI
#922
iamlll
closed
3 weeks ago
2
[BUG] Memory Leak maybe?
#921
mayishazn
opened
2 months ago
1
[BUG] Cellpose 3.0.7 does not remember that turning off auto-adjust saturation during image training
#920
leon11345e
closed
1 month ago
1
[BUG] DenoiseModel and CellposeDenoiseModel returning image flattened across one axis
#919
natelharrison
opened
2 months ago
0
Cellpose 3 runs out of GPU memory where Cellpose 2 didn't
#918
yassinharim
opened
2 months ago
3
cellpose on large .tif images (1GB-10GB)
#917
Nespresso2000
opened
2 months ago
4
[INSTALL] Cellpose not interfacing with GPU torch
#916
iamlll
closed
2 months ago
2
[FEATURE] a separate quantification algorithm or ability to input a single x-y coordinate as the position of a cell (instead of a mask)
#915
tanpancodes
opened
2 months ago
3
Allow for cell and nucleus detection
#914
lacan
opened
2 months ago
0
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