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Is GML all we need? Reading the [networkx docs on GML](https://networkx.github.io/documentation/latest/reference/readwrite/gml.html) it seems that GML isn't the best choice when it comes to portabilit…
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Hello everyone, I have an error reading graphml files. The error message is presented below:
Error in read.graph.graphml(file, ...) :
At foreign-graphml.c:599 : Cannot parse GraphML file, unkno…
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This task ticket maintains a list of packages failing self-tests.
Standard packages on `9.5.beta9` on both architectures (exhaustive list):
- cython (ticket ?)
- giac #32588
- linbox #32589
- pytho…
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R command line:
> my_cds_subset Retrieving normalized data ...
> DDRTree will be eventually deprecated in reduceDimension call and be used in RGE function instead. We are calling RGE for you now.…
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These are [permitted in OSM](https://wiki.openstreetmap.org/wiki/Relation:multipolygon#Touching_inner_rings) yet not by SF. [`osmdata.cpp`](https://github.com/osmdatar/osmdata/blob/master/src/osmdata.…
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### Create a map of bibliographic coupling and history of mp research
- [ ] #9
- [x] transform *biblioNetwork analysis* into df for [Gephi](https://www.r-bloggers.com/network-visualization-part-2-ge…
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**What is the feature or improvement you would like to see?**
Having a boolean associated to each vertex/edge that makes them mostly invisible to algorithms but reversibly (they can be reactivated).
…
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Hello,
I am trying to do a cross domain analysis on a relatively big microbial dataset.
On one hand I have a bacterial abundance matrix with 7000+ columns (aka species) and 38 samples
And on …
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Such as dataset, subj-id, sex, age, scan-id, etc...
Hurdle: in order to be done at graph generation it requires that we only accept a specific file format (.csv) with certain organization of covari…
gkiar updated
5 years ago
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Hi,
I am wondering if there are any functions to retrieve gene modules from network _net1$adj_ or any plotting functions.
Thanks,
Goutham A