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zdk123
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SpiecEasi
Sparse InversE Covariance estimation for Ecological Association and Statistical Inference
GNU General Public License v3.0
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Identifying Interactions Across Data Modalities (Potential New Way to Apply SpiecEasi)
#271
AntonKjellberg
opened
3 weeks ago
1
Cross-domain analysis with virus and bacteria abundance matrices
#270
07Chengran
opened
1 month ago
0
Running more than 2 matrices
#269
susheelbhanu
opened
1 month ago
4
Issue with Sparse Network and Missing Nodes in Spiec-Easi
#268
07Chengran
closed
1 month ago
3
How to filter output the results
#267
wfgui
opened
1 month ago
0
Mac M1 / R studio Version 2024.04.2+764 (2024.04.2+764) / R 4.4.1 GUI 1.80 Big Sur ARM build
#266
madlam-tech
opened
2 months ago
0
About getRefit function
#265
wfgui
closed
1 month ago
0
Problems installing
#264
jspychalla
opened
3 months ago
0
Using relative abundance in spieceasi？
#263
wfgui
closed
3 months ago
1
Using Environmental data
#262
UhP88
opened
3 months ago
0
Using a pre-filtered OTU table based on occurrence and relative abundance in spieceasi
#261
suahin
opened
5 months ago
2
How to add positive and negative associatons in the network.
#260
AlexCJ144
opened
5 months ago
1
R session aborted when using adj2igraph() with the tutorial data and code.
#259
vicflonun
opened
5 months ago
2
Error in i_set_vertex_attr
#258
kaumudiprabhakara
opened
5 months ago
5
Do not run multi.spiec.easi with unidentical sample scheme
#257
TeeratatK
closed
5 months ago
3
spiec easi in multiple steps
#256
gastronaut82
opened
6 months ago
8
cross-domain interactions
#255
gastronaut82
opened
6 months ago
1
I have a question for interpretation of my network results
#254
Marjan-Ghotbi
opened
7 months ago
0
Error in installing packages
#253
jlche
opened
8 months ago
3
ncpus not working when use sparccboot in windows.
#252
1870694249
opened
8 months ago
0
Constant Crashing with no error codes/etc
#251
szymanskishay
opened
9 months ago
1
Optimal lambda may be outside the supplied values
#250
ntromas
opened
10 months ago
0
Error when running adj2igraph on spiec.easi output: Error in t(object) : invalid 'lazy' to R_sparse_transpose()
#249
wesleysparagon
opened
10 months ago
8
Using SPIEC-EASI on transcriptomic data: plant/microbes
#248
GossypiumH
opened
11 months ago
0
R crashes whenever I run SpiecEasi::symBeta
#247
gastronaut82
opened
11 months ago
5
Github actions
#246
zdk123
closed
11 months ago
0
Fix github actions workflow and deprecate travis badges.
#245
zdk123
opened
11 months ago
0
Update pulsar and Matrix deps
#244
zdk123
closed
11 months ago
0
Coloring plot_network
#243
gastronaut82
opened
12 months ago
3
Error 'Csparse_transpose' not found
#242
GuillaumeSwB
closed
1 year ago
6
Return precision matrix in cov2prec
#241
zdk123
closed
1 year ago
0
Wrong return value in cov2prec()
#240
stefpeschel
closed
1 year ago
2
Can not install SpiecEasy package on my Macos Ventura.
#239
Becheler
closed
1 year ago
2
R aborts and says "fatal error" and forces session to be restarted
#238
kenbyrrrd
closed
1 year ago
2
Can't get network to run even at rep.num=1
#237
kkajihara
closed
1 year ago
3
Automate spiec-easi for non amplicon data
#236
pbelmann
closed
1 year ago
6
How can I get edge-weight from Spiec-Easi?
#235
scottwlee
opened
1 year ago
0
SpiecEasi on conda
#234
sghignone
opened
1 year ago
5
qqdplot_comm() function does not provide expected results
#233
SarithaKodikara
opened
1 year ago
0
Network with no edges
#232
minzooey
opened
1 year ago
1
caught segfault error on cluster
#231
GossypiumH
opened
1 year ago
2
Update license
#230
zdk123
closed
1 year ago
0
treatment of metagemoic data for virus + metabarcoding 16S data for bacteria
#229
yannreynaud
closed
1 year ago
2
Set a license
#228
laurentheirendt
closed
1 year ago
4
Unable to install SpiecEasi (Pulsar is removed from CRAN)
#227
kawanoii
closed
1 year ago
2
Add github action
#226
zdk123
closed
1 year ago
0
Unable to Install SpiecEasi
#225
kbazany
opened
1 year ago
5
Model selection for rank/beta penalty criterion of the SLR
#224
erfanshekarriz
opened
1 year ago
2
SpiecEAsi documentation
#223
Valentin-Bio-zz
closed
1 year ago
1
error installing via Rstudio
#222
spencerlong1
opened
2 years ago
1
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