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I am preparing a Debian package for openchemlib. Each package on Debian requires a description of at least ~200 characters. What would be the best description for openchemlib? It could as well go to R…
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I would like to make a bioconda package for funannotate -- as it is still difficult to install. Would be great if a conda expert would be willing to help out. So far there are some dependencies still …
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The annotation standard for proteomics experiments are not clear enough for curators.
Problems that are causing issues:
1. Differentiating between a purification and an enrichment
2. What to …
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@ToniNittolo Write skeleton for this advanced tutorial. It should be housed under Additional Analyses.
**1. Background on the use of protein structure prediction tools to predict function**
- Pr…
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#### I'm trying to do following to assemble a diatom:
(1) Kneaddata/Trimmomatic for my transcript reads;
(2) Mapping the reads to my unmasked genomes;
(3) Using RNA-Spades for the transcript as…
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Not sure if this is the right place to ask this question. But how does open cravat deal with variants that are not in any of the listed annotation databases. Does it still determine the impact on the …
inodb updated
5 years ago
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Version - 1.5.1
During the run I noticed that all of the gff3's that I passed into the prediction function were given ID's (other_pred 1-4) as I passed four gff's in. When I looked at the predict …
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Sorry if it sounds silly and not the right place to ask it. But I felt it could solve it better than posting it anywhere else. I am little confused with the concept, Graph embedding gives a numerical …
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- DNA topoisomerase IV complex
- A heteromeric enzyme, which in most bacteriophage species is composed of multiple subunits. Functions in chromosome segregation and can relax supercoiled DNA.
- Cell…
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Curate 10, 30 and 50 node boolean GRN models, use our code to generate input data that includes ExpressionData.csv (a gene by cell matrix) and pseudotime ordering of cells.