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I will continue the discussion here, until or if @keean can get Github to restore the thread. Luckily I still have a copy of the deleted #35 thread loaded, so I can copy and paste from it. If the orig…
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AlphaFold protein structure are now embedded on the PomBase gene pages. The experimental structures from pdb will also be included soon.
(or similar)
@kimrutherford feel free to edit
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Hi there.
I do not have a great understanding of 3d structure formats and my questions might be very basic to others:
Can we convert the 3Di tokens produced by foldseek to the actual 3D PDB files?
…
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Hi, thank you for your amazing work!
I am trying to evaluate GearNet on secondary structure dataset, but it gives me this error:
AttributeError: 'PackedProtein' object has no attribute 'node_pos…
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### Name
Josh Vita
### Email
vita1@llnl.gov
### Dataset name
AIMD-Chig
### Authors
Tong Wang, Xinheng He, Mingyu Li, Bin Shao, Tie-Yan Liu
### Links
* Publication: https://www.nature.com/arti…
jvita updated
6 months ago
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For any questions relating to how/why/ ... Or anything you don't know where to ask.
For bug, suggestion, ... please open [seperate issue](https://github.com/arose/nglview/issues/new)
PS: QA-0: htt…
hainm updated
2 months ago
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This issue will collect all feedback submitted via the feedback form at the end of each tutorial
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Results have been [aggregated](https://nbviewer.jupyter.org/github/bebatut/galaxy-training-m…
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https://doi.org/10.1038/s41467-023-43983-9
The activation mechanism of OR52 receptors has been elucidated, using cryo-EM of a consensus protein based on the OR52 family. The researchers did not onl…
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Firstly, @shabai517 thanks a lot for the first iteration of the web page. Here are some of the initial comments from my side and priorities:
**High-priority issues**:
- [x] Rename "Xiview Data…
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Dear Braker3 developers,
Here is a summary of our BUSCO results for the annotation performance of a termite genome with Braker 3 (RNAseq + insecta_odb10) and StringTie2. I also included the result …