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A recent change to the pathways2go conversion ended up producing some models that have multiple BP part_of BP links. (See pic below). These links reflect the reactome pathway part_of hierarchy. The…
goodb updated
3 years ago
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## Ontology title
Genome Biology Ontology Language
## Requested ID space
GBOL
## Ontology location
https://gitlab.com/gbol/GBOLOntology
## Contact person
Name: Jasper Koehorst
Em…
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In order for the GO-CAMs generated from Reactome pathways to work properly, software that works with the models needs access to an ontology that defines the physical entities within them. This ontolo…
goodb updated
4 years ago
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Edit: Está instalado. Parece que, cuanto menos, reconoce los elementos básicos, de modo que voy a listar aquí el resultado que da cada uno de los ejemplos que ofrezco y qué se debe arreglar.
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Form pre-validation or before save checks
- [x] GP is required
- [x] MF is required for Activity Unit and BP Only (root mf)
- [ ] if any term is provided, that term evidence is required
- [ ] if…
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## Description
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|-|-|
|**Date Released**|2020-04-22|
|**Release Reviewer**|@thewilly|
|**Release**|[shex-lite 2.0 beta](https://github.com/weso/shex-lite/releases/tag/v2.0-beta)|
|**Mail Thre…
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## Descriptive statistics
We should adapt and reuse the new implementation at: https://github.com/MaastrichtU-IDS/d2s-scripts-repository/tree/master/sparql/compute-hcls-stats
I think we should jus…
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El ejemplo de referencia es el siguiente:
prefix :
prefix xsd:
base
:Car {
:name xsd:string ;
:belongs @_:1
}
_:1 { a [ :Garage ] }
:User {
:name xsd:string ;
:worksFor {
…
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In this model, @tmushayahama was able to create a model with a compound as an enabler of an activity (see Kanamycin A on the right).
- [ ] autocomplete should not allow for the selection of a c…
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Update the readme documentation to cover the new CLI functionalities