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Hi there, I was trying to plot the UMAP based on my assigned identity, but this error keeps throwing up: Must request at least one colour from a hue palette.. Here is my code, I basically just created…
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**Describe the bug**
The config settings have no effect on `sr_setup` and therefore buffer size cannot be adjusted
**To Reproduce**
See that the result of `next(sr)` is the same regardless of b…
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https://mp.weixin.qq.com/s/ZAgpFExgKY7Xj5Ich5NWCg
ixxmu updated
12 months ago
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I've been running the `FindClusters` function, using the same inputs, and fixing all other parameters, using both `matrix` and `igraph` as values for the `method` parameter. Based on my understanding,…
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https://arxiv.org/abs/1706.02515
Deep Learning has revolutionized vision via convolutional neural networks (CNNs) and natural language processing via recurrent neural networks (RNNs). However, succ…
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https://mp.weixin.qq.com/s/JtBn0iEW2N9GBK5Oj0UJqQ
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Hi all,
I am integrating three datasets and after integration I want to find cell clusters. However, after I do that, all my `integrated_snn_res.*` memberships are all
This is the code I am usi…
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In reference to issue #7033:
The issue was closed without a solution. The initial solution provided by @alikhuseynov was very helpful, but I still need to make some adjustments to generate the fina…
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### Discussed in https://github.com/satijalab/seurat/discussions/7763
Originally posted by **mzz92** September 5, 2023
I'm having issues comparing DESeq2 results when run through FindMarkers …
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Hi,
I noticed that you made interesting different decisions regarding which graph to use for `FindClusters` function. In your tutorial, you use the knn graph when using direct dsb values, i know that…