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I noticed that references to Homo sapiens are assigned an NCBI taxonomy id:741158, which is an extinct human species.
I should be changed to NCBI taxonomy id:9606.
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If one wants to programmatically browse through glyphs, it's useful to be able to separate out the sequence feature glyphs from the molecular species from the interactions and interaction nodes.
As…
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Hi, thanks for the great tools! I tried mustache to call loops from high resolution Hi-C datasets of a species with a compact genome (~ 180 Mb). My loops of interest are relative long (1M - 10M).Since…
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Opening an issue to describe crashes with high vertical resolution.
So far this has only been seen with higher resolution simulations, and with CAM-MPAS.
The basic test case is 58L CAM-MPAS aqu…
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Translatewiki.net does not support trailing whitespace in messages. Those should be removed if not needed or another workaround to be found if cannot be removed (but do note translations already do no…
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Biological interactions are often described using "higher-order" language, in which an interaction modulates another interaction. Here, we propose to allow this in SBOL by allowing Participation objec…
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This is mainly a question for me...
Our preliminary analysis [here](https://github.com/EcoClimLab/tree-rings_global-change/tree/master/decadal_plots) (by @camerondow35 ) implies that size-correct g…
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Hi, I noticed that in the last hour there seems to have been a large change in the interactions API, and the interaction results seem to have changed greatly. I would like to know what kinds of change…
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Link to curation session
http://canto.phi-base.org/curs/3b2c44b436098af1
Link to NTR on GO tracker
Question about PAMP binding (receptor decy activity)
https://github.com/geneontology/go-ontolog…
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string-db.org has a web API described at https://string-db.org/help/api/.
We need to, at minimum, support calls to the API with multiple human gene symbols.