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ay-lab
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mustache
Multi-scale Detection of Chromatin Loops from Hi-C and Micro-C Maps using Scale-Space Representation
MIT License
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KR issue with mcool format while calling loop
#66
MaybeBio
opened
2 weeks ago
0
Cool file balanced or not?
#65
taojingfen
opened
2 months ago
0
Track files not accessible
#64
stfacc
closed
3 months ago
1
The reason why the number of loop is too small
#63
ziyi10
opened
4 months ago
1
error loading a .mcool file
#62
alexandremarcil
opened
5 months ago
1
installation error, Failed building wheel for hic-straw
#61
jiangshan529
opened
6 months ago
9
juicebox
#60
yunkyokim
closed
1 year ago
0
GW_KR vs KR
#59
mattiasaine
opened
1 year ago
0
tag latest versions
#58
jowodo
opened
1 year ago
2
differential loop analysis - how much difference it is?
#57
zhengrongbin
opened
1 year ago
0
list index out of range!
#56
ccmeth
opened
1 year ago
5
Legacy hic-straw code comment
#55
joreynajr
closed
1 year ago
0
question about diffloop results
#54
Lattesnow
opened
1 year ago
1
how to generate the z-scaore?
#53
DittmanC
opened
2 years ago
1
generate this errors, dont know if it's my .hic file has some problem
#52
Lattesnow
opened
2 years ago
8
.hic -ch error/Docker update?
#51
jaclyn-marie
closed
2 years ago
1
First 20MB of called loops missing for each chromosome.
#50
tolender
closed
2 years ago
3
Resolution of calling loops
#48
BenxiaHu
opened
2 years ago
1
potential incorrect variable name
#47
tzcoolman
closed
2 years ago
1
Interchromosomal analysis
#46
ycliangtaiwan
opened
2 years ago
3
issue using diff_mustache with .mcools
#45
Elphege-Nora
opened
2 years ago
1
issue related to .hic with kr normalization
#44
ccmeth
closed
2 years ago
1
Different output using hic format (v1.2.7)
#43
PaulaLopezMarti
opened
2 years ago
1
Out dated conda environment file
#42
z2e2
opened
2 years ago
0
differential loop analysis
#41
TerezaClarence
opened
2 years ago
8
no module named 'straw'
#40
ccmeth
closed
2 years ago
10
mustache.py does not take .hic file as input
#39
Michael-Szalay
closed
2 years ago
4
Updated code to use straw
#38
sa501428
closed
2 years ago
0
Diff_mustache vs regular mustache
#37
gdolsten
closed
2 years ago
1
[bug] analysis of front end of chr skipped at diffrent bin sizes
#36
fboellmann
closed
2 years ago
4
Calculation of distance limit?
#35
fboellmann
closed
2 years ago
1
TypeError: nan_to_num() got an unexpected keyword argument 'neginf'
#34
fboellmann
closed
2 years ago
4
crash during normalizing .hic file
#33
fboellmann
closed
2 years ago
0
Different number of loops when I'm using diff_mustache.py
#32
EnrichettaMileti
closed
2 years ago
3
Large loops
#31
meisterpeter
closed
2 years ago
1
TypeError: 'int' object is not subscriptable
#30
pna059
closed
2 years ago
1
Diff_mustache error in regulator function
#29
batzza
closed
2 years ago
6
Differential loop calling with .cool rather than .hic
#28
keoughkath
closed
2 years ago
2
Strange error from diff-mustache
#27
gdolsten
closed
2 years ago
8
Different output using hic and cool format
#26
yhx-tj
closed
2 years ago
11
diff_mustache.py crashing on input file format
#25
esebesty
closed
2 years ago
6
Differential option
#24
gdolsten
closed
2 years ago
6
Mustache crashes on hic file
#23
charlesfeigin
closed
2 years ago
6
mustache outputs on .cool file only chrX
#22
mblanche
closed
3 years ago
3
How to compare loops of Hi-C from different conditions?
#21
Linhua-Sun
closed
3 years ago
2
Different outputs using cooler and hic inputs with the same option.
#20
Linhua-Sun
closed
2 years ago
7
Mustache crashes on chrY using mcool files (cool files are fine now!)
#19
mblanche
closed
3 years ago
6
mustache crashing on normalization step for small .cool files
#18
mblanche
closed
3 years ago
8
mustache crashing on human chrY in newly created .cool file
#17
mblanche
closed
3 years ago
3
Weight Column Error For Cooler Matrices
#16
sjquon
closed
3 years ago
6
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