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This is an odd one. Totally repeatable. Not seen in others (as far as I know):
```
[bash][gwatts]:idap-200gbps-atlas > python servicex/servicex_materialize_branches.py -v --distributed-client schedul…
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- Create separate `venv`
- Install dependencies from `requirements.txt`
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Hi
I am try to convert a hdf5 biom 2.1 file using `biom convert -i data.biom -o table.from_biom.txt --to-tsv`
I checked that the file validates:
```
(.venv) me@12345 biom-test % biom validate-t…
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python version 3.11.0
pyfunctional 1.5.0
it raises like this. what's wrong?
```
File "/venv/lib/python3.11/site-packages/functional/io.py", line 2, in
import lzma
File "/.pyenv/versions…
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Currently the repo uses both Nix and venv to create dev environments. It's possible to dispose of venv and only use Nix. It would make development and test runs cleaner and easier to perform.
I can i…
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Implement RNA-Sequence Analysis Workflow as per the following steps.
Quality assess and clean raw sequencing data
Align reads to a reference
Count the number of reads assigned to each contig/gene…
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**Operating system**: Linux (Fedora 39)
**wxPython version & source**: 4.2.1 from source
**Python version & source**: Stock 3.10.13 via PyEnv
**Description of the problem**:
The build fails wi…
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I getting this error for episodes I've ripped from a few particular series. In most cases I've had no problem, but these appear to be getting something unexpected - maybe there is an edge case which n…
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**Describe the bug**
SMTP stopped working (since end of April) and the error shown by testing the email send is the following:
```
Traceback (most recent call last):
File "", line 198, in _run…
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Currently we asssume there is preset python virtual environment for _one-cmds_ we provide.
There maybe cases when user wants to override this virtual environment, such as for experiments with latest …