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I would like to run Matilda (classification). However I don't have the inputs in .h5 format. I only have gene expression matrix (in .csv), a ADT matrix (in .csv), and labels. Is an easy way to run Mat…
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Currently, the scran wrapper in SCONE uses a value of sizes that is not the default in scran:
https://github.com/YosefLab/scone/blob/master/R/SCONE_DEFAULTS.R#L136
@mbcole what is the rationale fo…
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```
ERROR: duplicate key value violates unique constraint "pg_class_relname_nsp_index"
DETAIL: Key (relname, relnamespace)=(devices_schema_version_id_seq, 2200) already exists.
STATEMENT: CREATE…
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Hello,
I have been trying to use the CITE-seq-Count script, but cannot get it to complete. It keeps getting hung up at the "Looking for a Whitelist" process. Any ideas what could be causing this? I …
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Hi,
I ran cite-seq count on cell hashing data using the whitelist from the cellranger filtered output. Since it's 10X V3 data, I mapped the cellranger filtered output barcodes to the 10X genomics w…
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_From @bob-carpenter on February 12, 2014 18:9_
It'd be nice to have the Zipf distribution in Stan:
See: http://mathworld.wolfram.com/ZipfDistribution.html
The pmf is involves the Riemann zeta fun…
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Congratulations on such a great job! I have some questions below and look forward to replying:
1. textual attribute substitution is only used in inference? is it right? What happens when used in trai…
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The [cited paper](http://arxiv.org/abs/1609.01454) attention mechanism is :
`
this was solved by following [#15 ](url…
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