-
I've encountered an error with one of the organisms we recently uploaded to Apollo. The error pops up with the message:
There was a problem processing your 'trackList.json' file: (TypeError) : null…
-
computer momory is 16G ,linux centos 6.5, cpu :3core ,client 150 concurrent (in other computer) ,
After two hours Message broker heap space out of bounds for Java!!
TID: [] [] [2017-05-11 0…
-
I ran spades.py on my reads to have a plant genome assemby which has an estimated size of 600M. I am providng a memory of 998G but it was stuck at subclustering hamming graph for 2 days. I have Nanopo…
-
Thank you @christinehou11 for this great package! One question I had was if we could make the names of the columns uniform? For example, I noted we have `dataset_type` (it does not end in an s) and `d…
-
Kindly comment on this issue why you are interested in this mini-project
-
Hi there,
I'm very excited to try using `decontam`, but I'm not sure it'll work with our data. I'd be grateful for any advice.
I've got the following `phyloseq` object (16 true samples and 5 con…
-
Hello,
I've been using your Revelio with Freebayes to call variants on methylation libraries. We were able to get good agreement between our methylated libraries and benchmarking variant dataset. …
-
Hello,a few days ago I read a paper "MethylC-analyzer: a comprehensive downstream pipeline for the analysis of genome-wide DNA methylation" and I am trying to run the code "python MethylC.py command m…
-
A non-pipeline, standalone version of #151
-
BACKGROUND: The Protein Ontology has been using a relation 'has_gene_template' for close to 10 years. In an attempt to come into alignment with updated principles, we wanted to at least place the rela…