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For the first version make sure the latest version provided by @meuleman here:
https://www.meuleman.org/research/synthseqs/#material
Specifically, we have the following datasets available:
**tra…
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貼吧活動：(請查閱 [SARS-CoV-2 Timeline by 2020.02.21](https://github.com/agorahub/_meta/blob/agoran/theagora/sari/Memorandum_2020-02-21_SARS-CoV-2-Timeline_Nathan.pdf?raw=true), by Nathan :cloud: )
- Colla…
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https://mp.weixin.qq.com/s/UB6H3QS0dDpf7n1uVVSR1w
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https://mp.weixin.qq.com/s/dq0OhT8qloZN4cV8VKwNRg
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from @hitz
What are your thoughts on Objects like:
A “putative cis-regulatory element” defined by a consensus chromatin accessibility peak with or without supporting histone mark data"
Or
“An se…
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## **Describe the bug**
Pipeline is stuck on atac.read_genome_tsv:-1 on HPC. One time I was able to get the pipeline to work and atac.read_genome_tsv took about 1.5 hours to run. Since then, I've att…
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Hey thanks for the package. I was reading the dictys paper on bioarxiv and it says
To reconstruct a context specific GRN for each group of cells, Dictys first infers TF binding sites in regulato…
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Hi there,
Just wanted to say great paper, its fantastic that you can push the throughput by optimizing the decrosslinking.
I am currently using Pore-C but adapted using DNase based method to fra…
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I just wonder is there a way to obtain the strand information (either + or -) of the consensus peaks? Thank you.
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Hi,
I was trying to create an easyconfig for this tool: [](https://github.com/kundajelab/phantompeakqualtools)
I read the tutorials, all the info on Easybuild website, and I tried my best, but i…