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Hi, I meet the error below when I was running whatshap genotype.
```
======== Writing VCF
Traceback (most recent call last):
File "/home/zicong_zhang/miniconda3/envs/whatshap/bin/whatshap", li…
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Increase parallelization by splitting the chr before joint-genotyping. Also prevents wasted effort genotyping chaff.
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### Ask away!
Dear all
I extracted recently str results using GRCh38 reference.
My understanding is that wf_str_repeats.bed is input bed file of straglr genotype stage.
My Questions
1. Does wf_…
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Hello jyhehir,
I have one question related to mobster vcfs (created with MobsterVCF).
Is it possible to genotype and/or annotate the resulted vcfs with any program? If so, could you give me some…
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# Dengue virus DENVx genotypes
An update regarding the classification of dengue virus (DENV) genotypes. As suggested by @rneher in a [Slack channel](https://bedfordlab.slack.com/archives/CM3QYTQ10/…
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Dear Authors,
I follow the instruction to install required modules. But when I run search_relax train.py I received no module genotypes. May I ask how can I install this module?
Best
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Expected Behavior
--------------------------------------------------------------------------
Given a list of clones, retrieve genotype data from multiple genotyping protocols at once, as opposed …
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Hi developers!
Your GridLMM package greatly helped my study. I appreciate.
However, I got the following error when I executed "GridLMM_GWAS" using my genotype including missing.
if (all(range(X)…
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how can I comprehend the genotype like 0/1|1/1|0/2|2/3…and how about the A、B、C in the tsv result?
how can I filter the sites by SILHOUETTESCORE & CALINSKIHARABAZESCORE&LOGLIKELIHOOD, are there any re…
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Hello, thanks very much for your previous answers. And I have another small question recently. Why gridss can not generate the genotypes of SVs (i.e., 0/1,1/1), and some other SV callers can give the …