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Hello rest-state-fmri repo,
First, I'm excited about the development of this script! I was a postdoc at Duke a few years back and was a big fan of this BIAC pipeline.
Second, I ran into some iss…
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Hi all! I executed the SWM parcellation on a tractogram in MNI space with 15 points per fiber, using the following command:
> ProjectAtlasGeoLab -i /media/fibras/DATA/subjectHCP/3Msift_15p_sv_MNI.b…
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Dear all,
After I finish the vertexLm and get the t-value thresholds with vertexFDR, I needed to go to minc Display and get the MNI coordinates of each significant PEAK by hand. I could not find a …
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Hi!
I found the group 1 data in MNI BITE website: http://nist.mni.mcgill.ca/bite-brain-images-of-tumors-for-evaluation-database/. But there are only 2d/3d ultrasound data without the tracking 4*4 pr…
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I'm trying to move my variables defined at the top of pipeline into a config file so I can offer differently configured versions.
At first glance, I expected to be able to just move the variables i…
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The following error when assembling a pipeline in C-PAC 1.0.1 without MNI registration on:
```
ERROR: Invalid Connection: alff_to_standard_smooth z-score standardize: 0, resource_pool:
{'anatomical…
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Hi,
I was wondering if there are surface files (such as giftis or freesurfer surfs) for the volumetric MNI templates. I've seen some in various packages but I haven't come across an archive that co…
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### Operating system and version
Ubuntu 22.04.3 LTS
### CPU architecture
x86_64 (PC, Intel Mac, other Intel/AMD)
### ANTs code version
antsRegistration: error while loading shared libraries: libI…
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Dear Micapipe developers,
I tried to run micapipe on sub-HC001 in MICs dataset, and used commands same as the example. All status seemed to be completed, but all QC reports except "proc_structural"…
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According to the NIFTI spec:
https://nifti.nimh.nih.gov/nifti-1/documentation/nifti1fields/nifti1fields_pages/qsform.html
```
#define NIFTI_XFORM_UNKNOWN 0 /! Arbitrary coordinates (Method 1…