issues
search
MICA-MNI
/
micapipe
micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read The Docs documentation below
http://micapipe.readthedocs.io
GNU General Public License v3.0
89
stars
31
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
CSD on single-shell diffusion data: should this be done with CSD or SS3T instead of MSMT-CSD?
#140
MRTanja
opened
2 weeks ago
0
DTI metrics derived from multi-shell data with high b-values
#139
MRTanja
opened
2 weeks ago
0
added path for mrtrix3 to work
#138
stebo85
opened
2 weeks ago
0
MRtrix3 was not found during proc_structural
#137
DannyStruijk
opened
4 weeks ago
0
Help pulling from docker -- metadata for targets expired?
#136
hansen508
opened
1 month ago
0
Task status is COMLETE but creates an empty output
#135
xmpham
opened
1 month ago
0
Add option to set number of SWM surfaces in -SWM and -MPC_SWM modules
#134
y0ungeunii
opened
1 month ago
0
Using eddy_cuda when applying dwifslpreproc in MicaPipe
#133
PaulBautin
opened
1 month ago
0
COMMIT tractogram filtering in MicaPipe
#132
PaulBautin
opened
2 months ago
0
Neurodocker ANTs installation fail
#131
PaulBautin
opened
2 months ago
0
Labels of the full-connectome matric with the aparc-a2009s parcellation
#130
jbdavion
opened
2 months ago
0
[WIP] NORDIC denoising on dMRI images
#129
PaulBautin
opened
2 months ago
1
MEDIC susceptibility distortion correction in MicaPipe
#128
PaulBautin
opened
2 months ago
0
NORDIC denoising in MicaPipe
#127
PaulBautin
opened
2 months ago
0
Motion correction option
#126
royj23
opened
2 months ago
0
Some problems with startup.
#125
yutian0315
opened
3 months ago
0
FC matrices row and column names
#124
ashapsoncoe
opened
3 months ago
0
-proc_func command operation problem
#123
wangzx963
opened
3 months ago
0
B0 threshold is not a valid integrer: DEFAULT
#122
sue192
opened
4 months ago
1
Failed to pull micapipe:v0.1.5
#121
jiazhuotao
closed
5 months ago
0
Module QC failed
#120
zhaopluseins
opened
6 months ago
4
Issue encountered in partition mapping during FC computation using micapipe
#119
logicxie
opened
6 months ago
0
stuck at initialisation
#118
Liz-Yuanxi-Lee
closed
7 months ago
0
proc_surf does not fully run with externally processed fast/freesurfer
#117
araikes
opened
7 months ago
0
proc_func does not proceed
#116
KobaCemal
opened
8 months ago
1
Error Encountered During dwifslpreproc Execution
#115
swwalsh
opened
8 months ago
0
FIXED func mask overestimates, REMOVED filtering for multi-echo
#114
shyu2kko
opened
8 months ago
1
remove highpass filter for multiecho
#113
shyu2kko
closed
8 months ago
0
Proc_structural [ ERROR ]..... Subject xxx doesn't have T1_nativepro
#112
nichy-consortium
opened
9 months ago
1
Update with newer FSL and eddy_cuda10.2?
#111
tannerjared
opened
9 months ago
0
Stuck at proc_func
#110
hoptman
opened
9 months ago
5
"RepetitionTime is missing in"
#109
hoptman
closed
9 months ago
4
Atlas-defined time series output
#108
benjaminsipes
closed
10 months ago
1
"SINGLE" BIDS session error with proc_func
#107
benjaminsipes
closed
10 months ago
1
FC missing ROIs for all parcellations
#106
kbatista-gr
opened
11 months ago
2
[WIP] Deployment of HTML documentation on alternative webhost
#105
blaisb
opened
11 months ago
0
[FIX] incorrect atlas name for glasser in docs
#104
amnsbr
closed
1 year ago
2
Bugs report for ICA-FIX dependency and ...
#103
gourdchen
opened
1 year ago
5
Adding translation step improves ANTs registration in some datasets
#102
MarkNelson86
closed
10 months ago
1
How to Specify the data directory?
#101
BrianYahoo
closed
1 year ago
2
realpath No such file or directory
#100
BrianYahoo
closed
10 months ago
1
ERROR ]..... B0 threshold is not a valid integrer: DEFAULT
#99
hoptman
closed
10 months ago
3
volumetric tSNR calcs
#98
jordandekraker
closed
1 year ago
1
Volumetric tSRN
#97
jordandekraker
closed
10 months ago
1
Running micapipe after docker pull
#96
LPNC-LANG
closed
1 year ago
15
FastSurfer tries to run singularity w/in containerized call and fails
#95
bcmcpher
closed
1 year ago
4
Warning message
#94
araikes
closed
1 year ago
1
QC_subj terminates early without all outputs
#93
araikes
closed
1 year ago
3
Loading prerun fastsurfer
#92
araikes
closed
1 year ago
2
Issue in set-up
#91
marcellamontagnese
closed
1 year ago
11
Next