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**Describe the bug**
![QQ截图20211122202750](https://user-images.githubusercontent.com/60460773/142825168-bcd420eb-5949-4cc2-8e8a-d6bd2d25adab.png)
The name of the compounds ("葡萄糖" and "氧") should be …
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Thanks for developing GetOrganelle, it seems very complete and thorough. I am trying it for species of Ericaceae, hopefully it will handle the small repeats better than other software I tried in the p…
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organelle_PBA step : blasr is not working. I tested that blasr tool is working but not in the Organelle_PBA.
data structure:
dir "test" has the fastq file, reference file
outdir (-o) is artha_ch…
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Hello,
I've encountered an issue which prevents me from reproducing the example code for GetOrganelle. Essentially, it seems that GetOrganelle is searching for the bowtie2 large index file (.bt2l),…
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There are some inconsistencies at the top level in the localization branch.
**CURRENT DEFINITIONS:**
(1) GO:0051179 localization
Any process in which a cell, a substance, or a cellular entit…
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Hello,
I used Novoplasty on metagenomic data. I used this file as a configuration file:
============
Project:
-----------------------
Project name = MS_assembly_chloroplast
Type …
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I have the same problem as some before me.
sprai-0.9.9.7.tar.gz
I installed and updated Sprai using : lpm update sprai
2) Running assembly (Sprai) (Fri Jun 7 18:22:43 CEST 2019)
========…
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Hi,
I am analyzing the p- and a-contigs of a FALCON assembly, and within the p-contigs I see that there are canonical linear contigs (e.g. 003655F), circular contigs (3702) and linear "R" contigs (00…
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## Issue summary
Fewer images / organelles / conditions
## Details
> Too many sample images, way too teeny. Five columns should be enough in part B to make the point. The label at the bottom in p…
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when use snakemake -s cisDynet_snakemake.py -j 20.
i get this error
Shutting down, this might take some time. Exiting because a job execution failed. Look above for error message.
fllow is my log …