AllenCellModeling pytorch_integrated_cell issues

AllenCellModeling / pytorch_integrated_cell

Integrated Cell project implemented in pytorch

43 stars 11 forks source link

issues

Newest

Newest Most commented Recently updated Oldest Least commented Least recently updated

Bump scipy from 1.1.0 to 1.10.0

#102 dependabot[bot] opened 1 year ago
0
Bump torch from 1.2.0 to 1.13.1

#101 dependabot[bot] opened 1 year ago
0
Bump pillow from 5.2.0 to 9.3.0

#100 dependabot[bot] opened 1 year ago
0
No matching distribution for lkaccess

#99 antoineruzette opened 1 year ago
0
Bump pillow from 5.2.0 to 9.0.1

#98 dependabot[bot] closed 1 year ago
1
Bump pillow from 5.2.0 to 9.0.0

#97 dependabot[bot] closed 2 years ago
1
Bump pillow from 5.2.0 to 8.3.2

#96 dependabot[bot] closed 2 years ago
1
inplace operation Runtime Failure

#95 JPFrancis opened 3 years ago
0
Bump pillow from 5.2.0 to 8.2.0

#94 dependabot[bot] closed 2 years ago
1
Bump pillow from 5.2.0 to 8.1.1

#93 dependabot[bot] closed 3 years ago
1
merge actk dp etc into master

#92 donovanr opened 3 years ago
0
Serotiny workflow integration: Reimplement some of the notebooks in serotiny

#91 ritvikvasan closed 1 year ago
1
New results: Analyze latent space of the segmentation models for the variance, and mito datasets

#90 ritvikvasan opened 3 years ago
0
Documentation: Args file and its contents

#89 ritvikvasan opened 3 years ago
0
Notebook example: Pass a single image through a trained model (ref and structure), get latent vector, generate structure

#88 ritvikvasan opened 3 years ago
0
Notebook example: Generate multiple structures from a trained model into a single cell shape

#87 ritvikvasan opened 3 years ago
0
Notebook example: Explore latent space of a trained model

#86 ritvikvasan opened 3 years ago
0
Notebook example: Train a 2D, 3D model on any dataset from scratch

#85 ritvikvasan opened 3 years ago
0
Ref segmentations

#84 donovanr opened 3 years ago
0
fix model diagram image

#83 donovanr opened 3 years ago
0
PlosCompBiol submission guidelines

#82 tknijnen opened 3 years ago
0
logistics: Add authors to manuscript

#81 donovanr closed 4 years ago
0
logistics: clean up manuscript to get started again

#80 donovanr closed 4 years ago
0
Discussion: vanilla is ok

#79 donovanr closed 3 years ago
3
Discussion: latent space orthogonality / reproducibility

#78 donovanr opened 4 years ago
0
Discussion: Loss function

#77 donovanr closed 3 years ago
2
Discussion: β-VAE vs GAN

#76 donovanr opened 4 years ago
1
Results: Content related to Fig. 5

#75 donovanr opened 4 years ago
1
Results: Figure 5

#74 donovanr opened 4 years ago
2
Results: Content related to Fig. 4b

#73 donovanr opened 4 years ago
0
Results: Content related to Fig. 4

#72 donovanr opened 4 years ago
0
Results: Figure 4

#71 donovanr opened 4 years ago
0
Results: latent space truncation

#70 donovanr opened 4 years ago
0
Results: interpretation of the latent space dimensions

#69 donovanr opened 4 years ago
0
Results: reconstruction vs. compactness -- KL vs. dim plot

#68 donovanr opened 4 years ago
0
Results: Content related to Fig. 3

#67 donovanr opened 4 years ago
1
Results: Figure 3

#66 donovanr opened 4 years ago
1
Results: talk up good organelle distributions

#65 donovanr opened 4 years ago
0
Results: Content related to Fig. 2

#64 donovanr closed 3 years ago
0
Results: Figure 2

#63 donovanr opened 4 years ago
1
Results: Table 1

#62 donovanr closed 4 years ago
1
Results: Figure 1

#61 donovanr opened 4 years ago
1
Intro: Finesse raw vs segmented images

#60 donovanr closed 4 years ago
1
Intro: contribution specificity

#59 donovanr closed 4 years ago
0
Intro: citations

#58 donovanr closed 4 years ago
0
Add contributing agreement markdown from AI

#57 Kimcmetzler closed 4 years ago
1
Code: Error during 'pip install'

#56 Calebium opened 4 years ago
1
Pape

#55 gregjohnso closed 4 years ago
1
Pape

#54 gregjohnso closed 4 years ago
1
Pape

#53 gregjohnso closed 4 years ago
0