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- Site: [https://salmon-dune-0e7191003.1.azurestaticapps.net](https://salmon-dune-0e7191003.1.azurestaticapps.net)
**New Alerts**
- **Content Security Policy (CSP) Header Not Set** [10038] total…
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**Is the bug primarily related to salmon (bulk mode) or alevin (single-cell mode)?**
salmon (bulk mode).
**Describe the bug**
A clear and concise description of what the bug is.
Segmentation fau…
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Are there plans to support Salmon or Kallisto for expression filtering, instead of using RSEM?
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at a certain size the menu bar becomes 2 rows. To fix this, combine schedule and salmon and remove one navigation item
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@AnnaD-M We're not quite at a place where we can do this yet. But what I would like to see is to be able to tag certain datasets in the PowerApps Data Inventory as being priority if they are associate…
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Good morning, my Trinity v2.15.1 jobs are timing out on my university's server (72hr wall time) at the salmon step. I can relaunch, but the jobs never move past salmon and outfiles are not updated. If…
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Barrels disappear when broken instead of dropping the item in last update.
Cod, salmon, tropical fish and pufferfish
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Oarfish produces three files as output:
* **\.meta_info.json** - metadata / mapping summary
* **\.quant** - tab-separated gene / transcript counts [tname, len, num_reads]
* **\.infreps.pq** -…
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(.venv) [user@server .smoked-salmon]$ python3 run.py migrate
Traceback (most recent call last):
File "/home/user/.smoked-salmon/run.py", line 7, in
import salmon.commands
File "/home/user…
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Hello,
I'm having trouble performing Analysis from Transcriptome Reference with salmon output.
Refer to the https://bioconductor.org/packages/release/bioc/vignettes/EventPointer/inst/doc/EventPo…