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EnTAP
Eukaryotic Non-Model Transcriptome Annotation Pipeline - Latest Release v1.4.0 - Revamped final graphics coming soon!
https://entap.readthedocs.io/en/latest/
GNU General Public License v3.0
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add updated std out prints throughout EnTAP execution
#104
harta55
closed
2 days ago
0
Merge EnTAP 1.4.0 changes into master
#103
harta55
closed
3 weeks ago
0
1.4 doc updates
#102
harta55
closed
3 weeks ago
0
1.4 doc updates
#101
harta55
closed
3 weeks ago
0
fix issue where EggNOG contaminant analysis may stay on
#100
harta55
closed
4 weeks ago
0
fix mobidblite interproscan database not being recognized
#99
harta55
closed
4 weeks ago
0
Merge in DIAMOND sensitivity controls for ini file
#98
harta55
closed
4 weeks ago
0
Adding Ref-seq diamond database for EnTAP
#97
Artifice120
closed
2 months ago
3
test
#96
harta55
closed
2 months ago
0
Merge EnTAP v1.3.0 into master
#95
harta55
closed
2 months ago
0
Merge in EggNOG contaminant analysis
#94
harta55
closed
2 months ago
0
Merge in EggNOG --dbmem command support
#93
harta55
closed
2 months ago
0
DIAMOND database error
#92
pavlo888
opened
2 months ago
11
fix pathing issue in entap_config.ini file for TransDecoder, update docs to version 1.2.1
#91
harta55
closed
3 months ago
0
now looking for 'mRNA' or 'transcript' in the 3rd column of GFF file rather than anywhere
#90
harta55
closed
3 months ago
0
Error code : 12 occurring in the Docker image.
#89
kodai-kishino
closed
3 months ago
0
Error code: 141
#88
baeyoungchoi
closed
4 months ago
2
implement mapping of COG category abbreviations from eggnog-mapper to full COG descriptions
#87
harta55
closed
4 months ago
0
remove --complete frame selection command
#86
harta55
closed
4 months ago
0
Version1.1.1: interproscan database error
#85
AlexGaithuma
closed
2 weeks ago
4
New release: config fail
#84
AlexGaithuma
closed
3 months ago
3
New release: Error in ini file
#83
AlexGaithuma
closed
3 months ago
6
Merge in EnTAP 1.2.0 changes from dev
#82
harta55
closed
3 months ago
0
Merge in 1.1.1 EnTAP changes
#81
harta55
closed
4 months ago
0
TransDecoder in Docker is missing perl dependency DB_File and URI::Escape
#80
WaljaWanney
closed
4 months ago
3
Merge EnTAP 1.1.0 into master
#79
harta55
closed
5 months ago
0
check-in eggnog mapper integration for testing
#78
harta55
closed
6 months ago
0
Implement Horizontal gene transfer
#77
harta55
closed
7 months ago
0
change 'ontology' directory to 'gene_family'
#76
harta55
closed
8 months ago
0
Only entap_results.tsv has the results
#75
sanyalab
closed
6 months ago
1
Cleaner installation on linux systems
#74
sanyalab
closed
5 months ago
2
Implement warning for log file when taxonomy information not found
#73
harta55
closed
9 months ago
0
Split config ini files
#72
harta55
closed
9 months ago
0
Split config ini files
#71
harta55
closed
9 months ago
0
Split config ini files
#70
harta55
closed
9 months ago
0
Remove gene mark support
#69
harta55
closed
10 months ago
0
Merge 1.0.1 changes into Master
#68
harta55
closed
10 months ago
0
GO term file written entirely to a single line
#67
nreid
closed
10 months ago
1
EnTAP database locations in the Docker image
#66
dence
opened
11 months ago
10
test pipeline for singularity
#65
sivasubramanics
opened
1 year ago
0
Merge required readthedocs file to master
#64
harta55
closed
1 year ago
0
Merge EnTAP version 1.0.0 changes from dev branch to master
#63
harta55
closed
1 year ago
0
Merge version 1.0.0 changes from dev branch to master
#62
harta55
closed
1 year ago
0
update TransDecoder parsing to address slight difference in output format
#61
harta55
closed
1 year ago
0
Reminder about Flask branch
#60
spficklin
opened
1 year ago
2
Merge in "FileRenaming" branch and modify output files
#59
harta55
closed
1 year ago
0
Add test data
#58
cynthiawebster
closed
1 year ago
0
Remove GO level analysis for Eggnog
#57
harta55
closed
1 year ago
0
Merge in changes to add new Gene Ontology tsv
#56
harta55
closed
1 year ago
0
Update entap database and remove Gene Ontology levels
#55
harta55
closed
1 year ago
0
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