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Apologies in advance if this is obvious..I am new!
I am using flowcraft via WSL2 (Ubuntu 20.04; singularity 2.5.2; i7 10th gen laptop with 16Gb RAM). Following the issues already noted, I downgrade…
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Dear Developer,
I am using SPADES 3.10 for 50X illumina and 10X pacbio assembly. The genome size is 6G and my RAM is 1T.
My command line is:
spades.py --careful -t 24 -m 980 --dataset dataset.yaml…
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The second `spades` call below should not be retrieving the first cached call, according to the documentation
```
Require::Require("PredictiveEcology/SpaDES.core@fdeada6f692513bbffe22c665a7da5215b…
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![King-Hearts](https://user-images.githubusercontent.com/18652395/103258264-7dbb94…
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### Discussed in https://github.com/day8/re-frame-10x/discussions/408
Originally posted by **beders** January 2, 2024
Hi there, first of all: thanks for re-frame-10x. Very useful.
That said,…
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There are a few ways the `quast` package could be improved:
- Separate build versus install. Opam has for some time supported a separate `install` phase, and install steps are recommended to go there.…
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I'm running paired-end fastq files through BacPipe and they go through TrimGalore fine, but when passed to SPAdes, an error appears that says "SPAdes assembly not found". Here is the log file attached…
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Hi,
I am facing an issue with SPADE.driver, which throws a subscript out of bounds error:
```
Script:
fcs
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When running the SPADE.driver command I consistently receive the following error:
Error in x[[sprintf("flowCore_$P%sRmax", k)]] : subscript out of bounds
Please note that I did double-checked that …
ghost updated
10 years ago