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Hi everybody. I have used pysamstat to calculate some statistics on my bam file. I saw on IGV that in the region of interest of bam file, where I used pysamstats, I have a lot of supplementary alignm…
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The following were not allocated VFB ids and hence never loaded into the system:
```
JFRC2_GMR_11B02_AE_01_05-fA01b_C100429_20100429091829562_02_warp_m0g80c8e1e-1x26r3.nrrd
JFRC2_GMR_14E09_AE_01_79-f…
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Viewing aligned map files in NGL indicates that they are in a different bit of space to the PDB files.
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For input elements, the current tag alignments will place the tag at the top left of the input container. Typically text/placeholder text will be placed in the middle of the container which means the …
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Dear PGGB team,
I have a few questions about your great program.
Based on the program, it appears that wfmash performs all-vs-all alignment on a single node. From my trials, this is indeed the c…
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Hi,
I wonder if anyone in this community can help me figure out the reason behind the discrepancy in counts. Please see below:
I am using HTSeq-count to generate counts from two different types …
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Hi
I'm using Orthofinder as part of my PhD to a) identify orthogroups b) infer gene trees from Multiple Sequence Alignments (MSAs) using IQTREE, and c) infer a species tree using IQTREE, for a fam…
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Hi,
I would like to be able to control the text alignment for columns in the body.
For example in the snippet below, I would like to have the data for "Date", "Start Time" and "End Time" to be rig…
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![image](https://cloud.githubusercontent.com/assets/9947422/13918697/3aedd81e-ef69-11e5-9a0c-26101ba61acc.png)
Hello. I'm trying to fix this and I cannot. How can I fix this?
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Hello,
I wonder how longphase handles supplementary alignments during phasing and haplotagging; as a separate read or they inherit HP/PS of the primary alignments.
Thank you,
Ayse