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Hello all!
I've been trying to run kilosort 3 on a concatenated Neuropixels 2 dataset. Lately I've been running into an issue with create_sorting_analyzer, while it is estimating sparsity. Basicall…
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Pradeep,
could something like this be of interest for the library?
The idea would be to create a class that would do fit and predict including deconfounding and the use of the estimator in an e…
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Hi! Can you explain what the difference between confounders and controls in Double ML? Shouldn't we consider all the features as X because confounders (W) influence on Y and therefore should be in the…
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* Code example including confounds
* Code example including prewhitening
* Explain regressor creation
* Explain GLM
* Explain confounds
* Explain prewhitening
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Hi,
(1) I just wonder if this tool is just the step to select features before building a model.
(2) In addition to clinical end points, if there are difference in other factors between two groups o…
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When running aCompCor with the containerized version 0.4.7 we obtain the following string parsing error:
Command:
```
docker run -it --rm \
-v $PWD/token_dataset:/token_dataset:ro \
-v $PWD/tok…
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**Bug description**
I'm currently running RABIES on the dataset available at this adress https://data.mendeley.com/datasets/fmb2fwb53f/2 , the preprocess and the confound corrections seems to be work…
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# The Proposal
As part of a deductive exercise, in this [issue](https://github.com/CharlesStover/use-force-update/issues/18) I essentially proposed changing:
```jsx
x = useCallback(cb , []);
`…
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One thing that has always bugged me about the way fold change is calculated is that it is not adjusted for latent variables. Only the p value calculation controls for confounding variables. Referrin…
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Hello,
I am trying your package and I have a question about the estimation of n.sv.
I see you recommend to calculate the n.sv on the y Y.r matrix of residuals after regression of the known confoun…