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### Version
Installed using Conda as described
```
conda create -y -n panaroo python=3.9
conda activate panaroo
conda install -y panaroo=1.3.4
```
### Command
```panaroo -i ~/wgs_campy/total/b…
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command line: python bigscape.py -i bgc_contigs_all_10k -o bgc_contigs_all_10k_bigscape_mix --mix
error msg:
generate_network took 57.462 seconds
Writing output files
Calling Gene Cluster Fa…
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Tracking updates of www.redditgifts.com
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### Description of the bug
Hello,
I've encountered a problem in the process defined at `NFCORE_MAG:MAG:GTDBTK:GTDBTK_CLASSIFY` while processing some single-end ONT whole-genome shotgun long read…
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Learn the default proccess...
The same process crediturs use when you fail to pay a bill timely.
"A defaulted affidavit stands as truth in law"
Affidavit / default & notice to cure / final de…
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Hello,
I'm trying to run ppanggolin cluster on the pangenome.h5 that was generated before combining fasta and gff files and I ran into the following error:
`>ppanggolin cluster -p pangenome.h5
…
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Hi,
This is great tool, i have used version 1. Now working with version2. I managed to install with conda, however i am getting following error
**wgd -h**
Usage: wgd [OPTIONS] COMMAND [ARGS]...
…
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Hello, when I run in test data and my data, I get an error at the paralogs-ks step like that, could you give some advice. Thank you very much.
ksrates paralogs-ks config_elaeis.txt --n-threads=20
…
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Given the fantastic new capabilities of dbcan 4 I am wanting to rerun some data I previously ran through dbcan 2. I have installed the latest version of the tool and attempted to run my samples throu…
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Dear Jacob
I used orthofinder for gene family clustering of five species (Ab, Ad, Ak, As, Lo). Then I would like to use orthoSNAP with default parameter to classify multi-copy gene families. But ther…