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I've noticed the genotype in the `FORMAT` field is often `0/0, 0/0, 0/0` so there is likely some filtering I need to do.
I was hoping to use `gatk VariantFiltration` to do this (unsure of other too…
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2022-07월 알고리즘 자율 풀이
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**Version**
I am using funannotate 1.88, with singularity
**Describe the bug**
Funannotate update crashes on "/venv/opt/pasa-2.4.1/scripts/cDNA_annotation_comparer.dbi " error reading input file
…
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Is there a Docker image available for RUFUS?
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Hi all,
I ran MTAG for 6 traits. The summary statistics were from GWAS using mixed models. Trait 5 was categorical, and all others continuous. To run MTAG, I converted the z score of trait 5 to …
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(fcb-bioimage)=
# bioimage-deposition
````{panels_fairplus}
:identifier_text: FCBxxx
:identifier_link: 'https://w3id.org/faircookbook/FCBxxx'
:difficulty_level: 3
:recipe_type: applied_examp…
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Dear Omeed,
When running MTAG on the GWAS results of two related traits (UKB data, phenotypic correlation 0.6), with sample overlap, I picked up some loci that were not significant in the GWAS. Ho…
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Transferring from email thread to this ticket.
Michael wrote on 2016-09-15:
There was a request to classify the PMCOA corpus according to more
topics than just Biology, Medicine, Genetics, Geno…
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(base) lrt@lrt-VirtualBox:/tmp$ prokka --compliant --centre X --locustag 9249 --outdir /home/lrt/Documentos/9249_todo/prokka_output_9249 --force --prefix 9249 --addgenes --rfam /home/lrt/Documentos/92…
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Hi Stephen,
We have a problem here, which has been seen in other posts, but we still don't know how to solve it for our own situation. Here are my files and error prompts.
my treefile:
[TPSa-bo…