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# Key specs for the MVP1
- [x] Have as many species as possible listed in https://brc-analytics.org/data/organisms
- [ ] Have all species from above registered as Galaxy Reference data with corre…
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I'm rerunning a pipeline after upgrading STAR to 2.9.4 and getting this error which used not to arise for the identical job.
It is unclear why this might now happen.
There is nothing in recent r…
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I was just wondering if anyone knew which GTF file I should be using for my AS analysis.
I'm using mapped BAM files that I've aligned to a Glycine max reference genome.
However, If I'm doing alterna…
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I have installed it as mentioned in the given link https://github.com/neherlab/pan-genome-analysis/blob/master/README.md
step 1
Installed:- git clone https://github.com/neherlab/pan-genome-analys…
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Hello,
I'm getting an error when trying to run croo after a successful run of the encode rna-seq-pipeline. My version of croo is 0.6.0
The command I ran is
`croo /storage/aadams/scripts/encode…
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A minimal viable solution must define how the information needs of the stakeholders are translated into queries and what the characteristics of the responses provided by the VP should be to fulfil tho…
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I encountered the following error when I test example data. Is there any solution to this error? Thanks.
[PEM-Q] primerChrom: chr15
[PEM-Q] primer_start: 61986633
[PEM-Q] primer_end: 61986652
[P…
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Hello Developers,
Thank you for melon,
I am working on nanopore shotgun metagenomics data and i am using melon.
I want to include fungii and virus genomes as well in the analysis as currently…
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Interop Contact:
Active in 2021: Active
**Researchers**: Xihong Lin (Harvard T.H. Chan School of Public Health)
## Analysis Question:
Large-scale Whole Genome Sequencing (WGS) studies and biobanks h…
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I am working with miRNA from a non model organism. I want identify both known and novel miRNAs. I have five replicates for each condition. Because my organism has no annotated miRNA, I used its close …