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Hi,
with `variable_step_size=FALSE` the GillespieIntegrator does not produce RCLL-Paths as in GillespieIntegrator.cpp
Line 236 `while (t < tf)`
allows the code to update the chemical-species even if
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- 1. What does this package do? (explain in 50 words or less)
This package brings together a number of tools that enable transport modelling and planning and R, with an emphasis on analyses needed…
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Hi,
I am Francesco Saporito, and I was intested in applying for the ODE Solver project. I have been poking around the code and reading the Julia manual, and I am getting toghether some ideas for the …
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Hi, I'm trying to replicate this tutorial http://kingaa.github.io/pomp/vignettes/getting_started.html, but instead of use CSnippet I want to use R function. I have not found any example of this. I wan…
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Test various kisao using tesedml. Add tests related to various algorithms.
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Sorry for brevity on the road so no (computer) Internet will update with code examples when I'm back Monday wanted to put this as a placeholder.
Completely kills the R and rstudio processes
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The SkewTableau.rectify() command currently runs JDT rather than taking the reading word of the tableau and Schensted-inserting it. This is inefficient for skew tableaux lambda/mu having a large in…
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The Gillespie simulator allows the copy numbers of molecules to go negative, which should not happen.
0u812 updated
8 years ago
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Check whether the hints are useful strings attached to them. For example the hint attached to
char *rrcCallConv getIntegratorHint (RRHandle handle)
returns
CVODE hint
Check all the hints for th…
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I can't remember if this is fixed in 4.X, but in 3.5.1, annotation assertions are not sorted deterministically on output.
This leads to spuriously large diffs for things like GO; e.g. one day's wo…