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When I try to build created project with code from the HLA book, it shows me this error:
![image](https://user-images.githubusercontent.com/16989713/51428982-7d60dd80-1c12-11e9-8741-80be85d52f51.png)…
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I'm getting a segmentation error when I ran HLA-LA at the --action HLA step. The stdout just says run was unsuccessful. If I run the part `./bin/HLA-LA --action HLA...` specifically, I get that it fa…
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Copied from https://github.com/hammerlab/mhctools/issues/40:
When feeding IEDB HLA alleles through `compact_allele_name`, I get some surprises:
```
compact_allele_name('HLA-A*02:01 A150P mutan…
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Hi,
I am analyzing my SNPs from hg19 using your tool. But I got errors when I was running the bmarkergenerator (and no output).
Here is the error I got.
#///////////////////////////
Error:…
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Dear authors
I would like to generate a customized reference. Unfortunately I get an error which I do not understand.
`(rnaseq) [staedlen@rkanc014is01 my_rnaseq]$ arcasHLA customize -G hla.tsv …
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I ran `mhcflurry-predict --list-supported-alleles > 'supported_alleles.txt'` to get a list of of alleles supported for mhcflurry.
I noted HLA-A*02:172, HLA-C*02:16, and HLA-C12:139 were not in tha…
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I've run into this error while trying to install hla:
`Error: No such file or directory - /private/tmp/hla20150726-1415-1gq7xrd/usr/.brew_home/.bashrc`
After running `brew tap billzajac/tap` I do:
…
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Hi Jonassibbesen !
In add_haplotype.sh of making pantranscriptome for 1kg_all_af001_imgt_hla_p10k_noB258_noN_a100_gencode100 :
-using this command line : "aws s3 cp s3://vg-k8s/users/jsibbesen/vgr…
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Teď funguje tak, že máme
```python
@dataclass
class AntibodyMatchForHLAType: # TODO: možná lepší název bude AntibodyMatchForAssumedHLATypes
assumed_hla_types: List[HLATypeWithFrequency]
…
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Hi there,
I am trying to integrate a newer version of the IMGT Database for my analysis but there seems to be an issue at the DRB1 locus. I downloaded the database from: ftp://ftp.ebi.ac.uk/pub/data…