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DiltheyLab
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HLA-LA
Fast HLA type inference from whole-genome data
GNU General Public License v3.0
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how to support DRB5 allele typing result
#118
lidd77
opened
14 hours ago
0
only for GRCh38? not Hg19?
#117
bioinfomatio
opened
5 days ago
0
how to use the latet IMGT to create PRG_MHC_GRCh38_withIMGT database from HLA-LA typing tool ?
#116
lidd77
opened
3 weeks ago
0
how to specify specific IMGT version ?
#115
lidd77
opened
1 month ago
1
the HLA analysis of tumor samples and control samples
#114
bioinfomatio
opened
1 month ago
0
G mean
#113
bioinfomatio
opened
1 month ago
0
Cannot support DRB3/4/5 ?
#112
lidd77
opened
1 month ago
0
high memory consumption from unused code
#111
suhrig
opened
2 months ago
1
[M::bwa_idx_load_from_disk] read 0 ALT contigs - empty sam files
#110
erah1
opened
3 months ago
0
Does it support the typing only based on long-read RNA-seq data?
#109
yuzhuxuyang
opened
4 months ago
0
ont2d not supported by bwa
#108
afadda1
opened
6 months ago
0
[Help needed] Unable to process a chr6-only BAM file
#107
kristineding98
opened
7 months ago
1
R_1.fastq and R_2.fastq are empty?
#106
scontente
opened
7 months ago
0
v1.01 and v1.03
#105
bsb2014
closed
7 months ago
0
Proportion of bases with good coverage
#104
pmccl027
opened
8 months ago
0
How to generate "reference_HLA_ASM.tar.gz" file
#103
ddzhang3
opened
8 months ago
0
Error - [main_samview] fail to read the header from "-".
#102
pablosoro
opened
8 months ago
1
HLA*ASM
#101
bsb2014
closed
8 months ago
1
Error: no compatible reference specifications
#100
pablosoro
opened
10 months ago
1
Use of uninitialized value $graph in concatenation (.) or string
#99
scontente
closed
11 months ago
0
No compatible reference
#98
angyonghaseyo
closed
8 months ago
10
HLA-LA file format conversion
#97
Sahu-Mousumi
opened
1 year ago
3
Decouple graphs directory with HLA-LA installation
#96
skchronicles
opened
1 year ago
1
haplotypes
#95
afadda1
closed
11 months ago
1
Error with graphs directory
#94
shawez
closed
11 months ago
1
Please use only alphanumeric characters for --sampleID
#93
serge2016
closed
11 months ago
3
Does HLA-LA remove duplicate reads first?
#92
yingchen69
opened
1 year ago
1
Error in htx_idx_push
#91
tessadgreen
closed
1 year ago
1
No contigs for extraction specified
#90
kvaldez
closed
11 months ago
3
error: Have found no compatible reference specifications
#89
champa82
opened
1 year ago
1
error after only use chr6 mapping
#88
ksmpooh
closed
11 months ago
1
unable to install via conda
#87
mattzano
opened
1 year ago
5
I need samtools >=1.3
#86
dennis-serum
opened
1 year ago
2
Error with test data
#85
mirpedrol
closed
11 months ago
6
DRB4*03:01N
#84
afadda1
closed
11 months ago
4
Fail to sterilize graph (Segmentation fault (core dumped))
#83
hqyone
opened
1 year ago
1
Unexpected end of file
#82
anoronh4
opened
1 year ago
1
Inconsistent need for hla_nom_g.txt?
#81
jfass
closed
11 months ago
1
Generating the Fasta or fastq for output after alignment to graph
#80
obedaram
closed
11 months ago
2
Error: Have found no compatible reference specifications
#79
Sahu-Mousumi
closed
11 months ago
1
Use of uninitialized value $graph in concatenation
#78
cathieeee
opened
1 year ago
1
Getting started with MinIon FASTQ Files
#77
fmobegi
closed
11 months ago
2
HLA-LA graph for KIR regions
#76
dagkesamanskaya
closed
11 months ago
1
remove unnecessary db:HTS module
#75
irunonayran
closed
2 years ago
2
v1.0.2 no conda available
#74
manolis2023
closed
11 months ago
5
new release for changes since v1.0.1
#73
dlaehnemann
closed
2 years ago
1
Pre-computed index graph
#72
BioinformaNicks
opened
2 years ago
1
Unknown option: action when HLA-LA install by conda
#71
rosaricla
closed
11 months ago
4
error for HLA-ASM
#70
hmyh1202
closed
11 months ago
2
execution not successful after "graph serialization"
#69
miriamsaffern
opened
2 years ago
2
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