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# Issue
For some variable vocabularies, an `apply_func` parameter is defined to derive a new variable from the existing one. The defined apply_func value is then evaluated via `eval()` to generate a …
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please help with this error
> metadata
sample_id title time cond time_cos time_sin
1 OM1A OM_1 1 OM 0.9659258 0.2588190
2 OM1B OM_2 1 OM …
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Hi Peter,
Thanks again for all your help yesterday! See attached for toy examples of when I managed to break ensr/ when it was a little less robust than glmnet to my dumb inputs :)
Gibhub wo…
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Hi,
after running an EWAS and getting an eBayes(lmFit()) object, I ran the function dmrff and found some DMRs:
| |chr | start| end| n| B| S| estimate| se| …
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I'm adding the contents here so we don't repeat work.
This is just a draft, please edit this.
1. Intro to Jupyter @JeanBilheux
- Shift tab / Shift Enter
- cells (edit and running mode)
- Rea…
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### Instrument
Light curve fitting (Stages 4-6)
### What is your suggestion?
Currently, we use scipy.optimize.minimize to do least-squares fitting in Stage 5. Performance-wise, this works okay, but…
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Sorry Samuel, I swear I'm not breaking things intentionally! ;)
With the latest commit to shift.py, for certain spectra, my test suite crashes with a ValueError (see below). If I roll back to the pri…
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I've been trying unsuccessfully to install Feff10 & corvus in a singularity apptainer under Ubuntu 20.04 (as well as on my base system under Ubuntu 22.04) for several days now. In the apptainer, I'm a…
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When I try to run `make install` under Python 3.10.9 virtual environment, it ends up with following up (I have upgraded pip):
```
Installed /home/admin/venv-py3109/lib/python3.10/site-packages/lmfi…
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Following on from internal Slack discussion (https://ritchie-lab.slack.com/archives/CDMAPG81F/p1706657023484329).
I'm generating a large number (> 150) glimma MDS and MA plots for the same project.…