hasaru-k GlimmaV2 issues

hasaru-k / GlimmaV2

interactive plots for differential expression analysis

GNU Lesser General Public License v3.0

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Synced to bioconductor

#93 Shians closed 5 days ago
0
#87: css fix

#92 hasaru-k closed 1 month ago
0
configurable minimum y-axis for expression plot

#91 hasaru-k closed 1 month ago
0
Blank plot when gene annotation only contains one column

#90 Shians opened 3 months ago
0
Saving Glimma html Files from Script

#89 danphillips28 opened 4 months ago
0
GlimmaXY() does not extract gene names from supplied vectors properly

#88 nghiaagent opened 4 months ago
0
The y-axis of the exprContainer on the right side is not adjusting the minimal expression value

#87 brunosa3 closed 1 month ago
7
Cannot "Save Data" after deploying website

#86 mei-du opened 5 months ago
1
Glimma Following DESeq2 and LogFC Shrinkage

#85 dpphill1 opened 6 months ago
0
Removing possibly redundant files

#84 PeteHaitch opened 7 months ago
1
Save plot function not working in Safari

#83 axz91 opened 1 year ago
0
[ISSUE 77] Resolving TOC Knitting interaction with Glimma

#82 hasaru-k closed 1 month ago
0
Testing Slack integration

#81 hasaru-k closed 1 year ago
0
BiocStyle::html_document does not render Glimma plots

#80 nztao closed 2 years ago
1
volcano plot got very slow in chrome with macbook

#79 axz91 opened 2 years ago
1
Error in buildXYData

#78 sarah872 opened 2 years ago
1
Rendering Glimma plots after knitting

#77 joseale2310 closed 7 months ago
7
Deseq2 no negative logCPM

#76 Pahi95 opened 2 years ago
1
Jitter Points

#75 danphillips28 closed 2 years ago
1
Bumping version to match bioc devel

#74 Shians closed 2 years ago
0
Deleted LazyData statement in DESCRIPTION

#73 Shians closed 2 years ago
0
Added volcano plot to vignette and some code fixes

#72 Shians closed 2 years ago
0
Improved status labels

#71 hasaru-k closed 2 years ago
0
Better messaging for comparison directionality

#70 hasaru-k opened 2 years ago
0
Textual legend values

#69 hasaru-k opened 2 years ago
0
PDF output

#68 hasaru-k opened 2 years ago
0
Minification pipeline

#67 hasaru-k opened 3 years ago
0
"all.equal(counts, round(counts))" causes errors in GlimmaMA (or GlimmaXY)

#65 yejilee-biostat closed 3 years ago
2
Added logrpkm transform for MA plots

#64 Shians closed 3 years ago
0
fix svg bug

#63 hasaru-k closed 3 years ago
1
MDS plot - can't save SVG

#62 hasaru-k closed 3 years ago
0
Expression colourscheme

#61 hasaru-k closed 3 years ago
0
rounding max count

#60 hasaru-k closed 3 years ago
0
colourscheme dropdown for exp plot

#59 hasaru-k closed 3 years ago
1
Rounding Max Value Warning

#58 hasaru-k closed 3 years ago
0
changing transform defaults

#57 hasaru-k closed 3 years ago
1
Dge polymorphism

#56 hasaru-k closed 3 years ago
0
Minor edits to help pages

#55 charitylaw closed 3 years ago
1
Update glimmaMDS.R

#54 charitylaw closed 3 years ago
1
Added single cell vignette

#53 Shians closed 3 years ago
0
Symbol column is extracted not cased

#52 hasaru-k closed 3 years ago
1
Changed "GlimmaV2" references to "Glimma"

#51 Shians closed 3 years ago
0
Initial merge of Glimma V1

#50 Shians closed 3 years ago
0
Added examples

#49 Shians closed 3 years ago
0
Save Data dropdown and MDS save button fixes

#48 OliverVoogd closed 3 years ago
0
Small tweaks to fix CI build

#47 Shians closed 3 years ago
0
Fixed dependency on Glimma v1

#46 Shians closed 3 years ago
0
Added options to transform.counts argument

#45 Shians closed 3 years ago
0
SC Data - Sparse matrix representation

#44 hasaru-k opened 3 years ago
0
MA Plot - Preserving "symbol" column casing

#43 hasaru-k closed 3 years ago
0