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According to the NIFTI spec:
https://nifti.nimh.nih.gov/nifti-1/documentation/nifti1fields/nifti1fields_pages/qsform.html
```
#define NIFTI_XFORM_UNKNOWN 0 /! Arbitrary coordinates (Method 1…
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As proposed in https://neurostars.org/t/older-adult-mni-template/5125, find out whether https://www.ncbi.nlm.nih.gov/pubmed/22440645 can be redistributed within TemplateFlow.
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From previous discussions, there does not seem to be clear consensus on either relaxing or tightening up the inheritance principle. I can report, however, a practical difficulty with the current rule …
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Relates to
- #636
as
```
yoh@typhon:/mnt/DATA/data/yoh/1076_spacetop$ podman run -it --rm -v $PWD:$PWD:ro afni/afni_cmake_build:AFNI_23.1.10 -- @afni_refacer_run -input $PWD/sub-0001/ses-01/…
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Spherical coordinate dipoles were not plotted correctly on the dipplot panels, e.g. faces_4.set
the call to `dipplot` currently uses hardcoded 'MNI' `coordformat`
Instead, take `coordformat` fro…
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dicom2bxh ${dicomParentDir}/${seriesNumber}/\* ${tempDir}/fmriSeries${seriesNumber}.bxh
bxh2analyze --nii -b -s ${tempDir}/fmriSeries${seriesNumber}.bxh ${tempDir}/fmriSeries${seriesNumber}
fslreori…
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Thanks for making available resseg.
It would be useful to update the installation instructions to add
`pip install antspyx`
when using resseg-mni.
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Once the papers have been filtered (#11) - key part of the preprocessing will be
- [x] determining the neural space used (MNI coordinates? atlas? which one?)
Whatever the paper is using,
- …
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Hi:
For the input spreadsheet to PINT, how do we suppose to find the vertex id corresponding to the given MNI coordinates?
Best,
Renxi
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You may be interested that this algorithm is available as `DenoiseImage` in https://github.com/ANTsX/ANTs and `minc_anlm` in https://bic-mni.github.io/