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Hey.
@martinagvilas @complexbrains and I were thinking of taking the tutorial list file and turning it into its own standalone repo and make it easier to navigate (read-the-docs, bookdown,... ?).
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### Title
Machine Learning for Stroke Lesion Segmentation
### Short description and the goals for the OHBM BrainHack
We'd love for people interested in machine learning for image segmentation to tr…
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Currently there is a 'slice_order' variable which specifies the slice order and is applied to all functional files.
To handle more complex cases (e.g. multiband acquisition), we can pass individual s…
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We are currently in the process of sharing developmental atlas templates and delineations on KG and would like to have these implemented in QuickNII and VisuAlign.
Nifti files are found here: Z:\HB…
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There are a number of brain parcellation schemes that we want to ingest into the ontology. Allen MBA and cocomac have been ingested (though cocomac has not been fully integrated into the ontology), bu…
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Several users and Trygve have requested the ability to have lateralised object counts + load. Can we calculate this in the output file for both left and right hemispheres.
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Hi @jefferis ,
I'm currently trying to move a nc82 stained image (3d stack) into a template space like `JFRC2`
![Screenshot 2021-01-23 at 14 23 35](https://user-images.githubusercontent.com/13106358…
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**Describe the bug**
I first saw this problem with a collaborator who is running this application.
**To Reproduce**
Steps to reproduce the behavior:
```bash
BraTSPipeline -u
```
Error message…
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In the samples directory the following URLs have moved:
Dartmouth-fMRI-Consent-Template.doc:
http://www.dartmouth.edu/~cphs/docs/forms/exp-fmri-consent-template.doc
NMR_MGH_samplefMRIconsent.ht…
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