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Yo Tomas,
I need your library to write out the cif file ([PR](https://github.com/krab1k/ChargeFW2/pull/7) I am submitting).
I am creating a branch to do this, however, I think it would be good …
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Hi, great tool!
To make it even better, it would be nice to also support protein level result export to .txt/.tsv, as is implemented for the peptide level table.
at least pFind.protein cannot read…
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Some functionality which is unlikely to be commonly needed, but is certainly not overly difficult to add/maintain are reference data sets/lookups such as: 1) various FASTQ quality encodings, and 2) DN…
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This UI was proposed:
https://slack-files.com/T01JPHYBFGF-F01NRMZ06G4-1d48ae0770
It seems a good idea, and it looks good. Images are already downloaded for the network, and the SMILE for each mo…
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It would be good to have some fleshed out use cases to understand what this file format will (and won't!) support. Here's a brainstormed list that probably reflects my biases:
Biomolecular
- A protei…
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The API ”www.ebi.ac.uk/Tools/crossbar/swagger-ui.html” is unavailability, is there any other way that I can access the database?
And is it possible that the code constructed the database be open sou…
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Hello,
We would like to be able to access the pombe gene name consistently given the PR:ID.
We have noticed that the name is usually included, but not in a specific filed. Is it possible to…
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At the moment 2DSCAN can be used with the Chemshell interface, the TRIC optimizer or the OPT++ optimizer. However the TRIC optimizer is very slow for big molecules like proteins and the OPT++ optimize…
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#### Summary: NCBI sequence identifiers which have been removed from the NCBI data base cause a "no link/record returned for: xyz".
#### Description:
When attempting to use the ncfp command to …