-
Hi，Thank you for your excellent package for deconvolution analysis; I run into the following error, Do you have any hints to solve this issue?
```
GSE134347.ens
-
Hi there, I am learning to carry out scRNA-seq data analysis with your dataset and workflow as is described in the paper. My question relates to the `20220209_edgeR_inCluster_byCell_GSEA.r` file.
A…
-
Dear infercnv team,
Hi, all! Thank you so much for great tool :-)
I happen to come across unreported error as follows when I run merged scRNA-seq data driven Seurat object.
Can anyone or @Georg…
-
### Meeting 09-02
From sample-wise, what makes the prediction worse?
**Still needs to select marker genes and check on marker genes.**
- Signal-to-Noise Ratio, average sequence depth, sparsity…
-
Hello.
Previously, a member from my lab was able to run your software (this was about 5-6 months ago).
I tried to reproduce their results using a different reference dataset.
However, when I tr…
-
Hi,
I'm just trying to replicate this analysis using the library data on GEO, and am missing the E_selections.fa file. Is this a list of all barcodes for index E? If so, would it be possible to pro…
-
Zarr would benefit from formal support of storing sparse arrays, though I'm not sure what this would look like and the process for getting there (e.g. placing the functionality in the core spec, creat…
-
Hi!
Just wanted to see if the read counts have to be normalized to account for sequencing depth, or if unnormalized counts are used as input.
Thank you!
-
Hi,
Sorry to bother you again.
I'm having difficulties interpreting the provided differential expression values.
I took values from the ASD_DEGcombined.csv file, which seem to be coherent wit…
-
HI！
I have two groups, control group and drug group. I want to compare intercellular communication networks and internal regulatory signals between the two groups. Could you provide the related co…