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Background and Challenge Question
Blood metabolomics profiling of healthy and COVID19 patients uncovered that patients with severe COVID-19 (WHO score 5-7) had significantly elevated plasma levels …
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Defining mutations:
XBB.1.22.1>C12068T, C25463A (ORF3a:T24N)
GISAID query: C25463A, A22161G, T28297C or (C12068T, C25463A by @Over-There-Is )
Earliest seq: 2023-04-10 (Austria, EPI_ISL_17497504)
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# TODO
* [ ] Close this issue when the **great fork merge** happens.
# Original comment
Like the thread in the [other repo](https://github.com/ioccc-src/mkiocccentry/issues/171) this is to he…
xexyl updated
8 hours ago
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XBB.1.16 (FU.1)/XBB.1.9.2 (EG.5.1) recombinant
7 samples from New Zealand/Lakes
EG.5.1 Spike
First sample: 2023-06-01
Latest sample: 2023-06-14
Query: Spike_Q52H, T3802C, A16878T (or T3802C, A…
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GISAID Query: Spike_V445P,Spike_Y453F,Spike_F456L
Nucs query : T18402C, G26640T, C28146T (edited)
Sequence 1: 2023-05-10, USA. EPI_ISL_17676308
Sequence 2: 2023-06-17, China. EPI_ISL_17836786
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I just spotted an XBB.1.19.1 with S:T478I, S:L455F, S:F456L
two sequences clustering together one from China early in May and one recent in Australia
tree:
![Schermata 2023-07-23 alle 12 53 13](ht…
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## Environment info
- `transformers` version: **4.11.3**
- Platform: **Linux-5.14.0-2-amd64-x86_64-with-glibc2.33**
- Python version: **3.9.7**
- PyTorch version (GPU?): **1.11.0.dev20211021+cu1…
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More info to be added
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This will be nothing but better to track it.
Its composite fitness score is still high:
![Schermata 2023-05-30 alle 00 27 43](https://github.com/sars-cov-2-variants/lineage-proposals/assets/876698…