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## Short description of the problem
The `--min-alignment-fraction` parameter of `anvi-dereplicate-genomes` is not working as expected.
## anvi'o version
I'm using the master version as of thi…
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Hi,
I`m running anvio-8 to do assembly and binning. I can successfully submit the job script with no errors but it fails after a few seconds. There is no error in the output file so I`m really conf…
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## The need
[dbCAN3](https://bcb.unl.edu/dbCAN2/) contains [dbCAN_sub](https://bcb.unl.edu/dbCAN_sub/) which enables substrate annotation for CAZymes. This upgrade will help catalyze CAZyme-related…
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Jon Sanders run into the following issue during `anvi-summarize` and sent the following traceback to anvi'o Slack:
```
[09 Dec 20 09:32:25 Summarizing 104 of 159: 'Bin_3_32'] Creating the FASTA fi…
meren updated
3 weeks ago
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## Short description of the problem
Using anvi-setup-scg-databases --scgs-taxonomy-data-dir doesn't work Installs to idiosyncratic /tmp file. It's not setting the -d parameter in diamond
## an…
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## Anvio installation
## anvi'o 8
Keep the header of this section, but replace this text with the output of this command in your terminal:
```
anvi-self-test --version
```
## System …
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## Short description of the problem
After updating conda and Anvio to the latest version, samtools had an issue with not finding a shared library libcrypto.so.1.0.0
## anvi'o version
```
…
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Hi,
I am having problems similar to issue https://github.com/merenlab/anvio/issues/931 related to building a phylogenetic tree.
```
anvi-self-test --version
Anvi'o ..........................…
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Hi there
I am actually not sure if this is an error or just a warning. I reinstalled Virsorter using the conda virtual environment instructions. Everything looks fine and seems to run fin but after…
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Dear Peakhood team,
I tryed to use peakhood on eCLIP data on a cytoplasmid RBP, but it crashes at the first step, it seems it is not able to open the .2bit file:
`Traceback (most recent call last)…