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Hi, I am trying to filter the fastq reads based on the phylum rank with the following:
```
blobtools filter \
--query-string "http://localhost:8001/view/blobtools_out_megahit/dataset/blobtoo…
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Hi,
I used fcs-gx for a bird genome assembly using singularity with version 0.2.3 following the instructions in the wiki. For the test I get similar results to the ones given, the major difference b…
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Hi Rich,
I'm trying to create a new blobdir from from a filtered dataset, but I get the following error:
```
Traceback (most recent call last):
File "/blobtoolkit/blobtools2/lib/filter.py", li…
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Hello everyone,
I am getting the follow error:
"Contig-taxid file random10k.example_scaffolds.fa.nt.1e-5.megablast does not seem to have two cols with the seqid in the first col and taxid in the sec…
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je viens de voir que blobology n'est plus maintenu et que l'auteur recommande d'utiliser blobtools https://github.com/blaxterlab/blobology
je sais pas à quel point c'est similaire, on peut l'instal…
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(base) [scott.geib@ceres ~]$ pwd
/home/scott.geib
-rwxrwxr-x. 1 scott.geib scott.geib 438M Sep 8 20:07 dmolik-blobtools.img
-rwxrwxr-x. 1 scott.geib scott.geib 521M Sep 8 19:52 dmolik-gen…
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Hello,
I am trying to run the prepare module but I get the following error:
$ ./avp prepare -a proteins.blastp.diamond.txt_ai.out -o results -f proteins.fa -b blastp.diamond.txt -x groups.yaml -c …
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https://blobtoolkit.genomehubs.org
sr320 updated
2 years ago
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I recently installed Blobtools2 using the directions found at https://blobtoolkit.genomehubs.org/install/ I followed everything correctly, but when I tried to run it I could not call the "blobtools" c…
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Hello, thank you for making blobtools! Everything's working great with taxonomy assignment and mapping coverage, except I think I'm having the same issue as #43 with adding BUSCO results, except I'm o…