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Hi velocyto-team,
I tried to analyze 10x scRNA-seq data,but when I added the "-m repeat_rmsk.gtf" option, run10x gives me an error.
`2020-05-27 21:14:15,943 - DEBUG - Assigning indexes to genes
202…
XYZuo updated
3 years ago
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## Proposed solution
1. Allow [Align.C](https://py-pdf.github.io/fpdf2/fpdf/enums.html#fpdf.enums.Align) to be passed as a value for `.l_margin` in [TextStyle](https://py-pdf.github.io/fpdf2/fpdf/f…
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The xindex/yindex options in ldas have always been problematic. The xindex/yindex in the NLDAS shapefile actually have to have 1 subtracted to be used with the LDAS web services. Haven't found GLDAS…
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Hi Yuanhua,
I am using v2.2 to count other types of AS, A3SS for example:
brie-count -a ~/genome/mm10/mouseAS/A3SS.gff3 -o . -S bamfile.list -p 8 -t Any
Even with -t Any option, this comma…
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Add a new service to sample and validate the following key indicators to guarantee the correctness of CKB Explorer
Indicators:
1. Count of live cells of a specific address
2. Balance of a specifi…
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Hello Alex,
I have a 10x sample, the mapping/counting results from cellranger and starsolo are very different.
The estimated cell number of cellranger count with default parameters was 9400 whil…
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Steps to reproduce:
- open counting, click through obvious applets
- in counting applet, switch too a large sigma (e.g. 20)
- click a few times into a small region of the image (see attached)
- result…
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This would be a nice feature to allow the "experiment" to happen on paper beforehand to be sure that the signal is strong enough, that the He cell polarization is sufficient, Flippers are sufficient, …
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0. Look at what APIs jemalloc itself has for introspection
1. Replace `pub static TID: RefCell = RefCell::new(0);` and the like with `pub static TID: Cell = Cell::new(0);`
2. Replace with const thre…
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When running Shor method 2 with >17Q, I get the error:
```
---------------------------------------------------------------------------
ValueError Traceback (most rec…