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On https://github.com/metriport/metriport-internal/issues/670 we defined how we want to implement SDK and doc generation - with [Fern](https://buildwithfern.com/).
Let's use this ticket to map the …
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I think this would be fantastic data for a seeded watershed on the tubulin.
image_data/xyc_8bit__dapi_tublin.tif
There are also two touching nuclei, where a distance transform based watershed is abl…
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I would like to have a disconnect() function available on Teemo dApi, so that I can trigger a new wallet connection if the user wants to change the wallet.
Basically something which triggers a disc…
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The current image alignment for multiplexing projects struggles with low DAPI intensities or bright, non- cell debris. It is important to ensure proper alignment of the images over all cycles.
I …
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#### Bug Report Checklist
- [x] Have you provided a full/minimal spec to reproduce the issue?
- [x] Have you validated the input using an OpenAPI validator ([example](https://apidevtools.org/swagg…
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As reported https://github.com/IDR/idr-metadata/issues/696#issuecomment-2188560610
- Image:38517 & Image:40053 - 5th & 7th plates of idr0008 (58 plates)
Viewing in webclient: `message = Error inst…
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Hi,
Thanks for the super impressive tool which helps me a lot.
But I found some issues when running deepcell mesmer: only nuclei mask.tif was obtained for ome.tiff file/non-RGB tif files. My ome…
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hi
i have some issues with rule34 now
ever time i try to download it give me this:
[rule34][warning] Cloudflare challenge
[rule34][error] HttpError: '403 Forbidden' for 'https://api.rule34.xxx/i…
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Rendering commands that take channels fail when you pass channel names instead of indices.
## Example
```python
from spatialdata import SpatialData
from spatialdata.models import Image2DModel
…
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Have an additional function that allows the user to expand the label image (mainly for the parent layer which could originally be a DAPI-stained image). This is very straightforward using skimage.segm…