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Can't find folders in certain environment ( tier1 vs tier2.)
EMBL compute cluster with almf-fiji
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When a table (`default.tsv`) contains only column headers and no data rows, the `TableOpener.open()` method returns a table with an empty column list:
Input file:
```
label_id anchor_z anchor_y a…
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Hi,
When trying to run admin/Build_Trinotate_Boilerplate_SQLite_db.pl Trinotate, I receive the following error:
admin/Build_Trinotate_Boilerplate_SQLite_db.pl Trinotate
* [Tue Nov 14 16:45:31 2…
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I'm attempting to run TEclass2 on our cluster. Installation ran smoothly after a few tweaks to the environment,yml file. (This may be part of the problem but I don't think so.)
I have a file with k…
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We have option to sync EMBL taxonomy from ContentHub to Wordpress, whenever we click the link to sync we are getting timeout in sync process.
![Screenshot 2020-10-05 at 10 48 35](https://user-images.…
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@babisgalouzis
Could you please try this and report here whether it works?
https://github.com/embl-cba/DNA-FISH#installation
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Hi!
I'm using the online eggnog to annotate my protein sequences. I updated my sequence and click the start button, I saw my job was running in the "Server Status" in "http://eggnog-mapper.embl.de/…
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We currently only look for `.emblem`, but `.embl` and `.em` also seem to be used in some projects.
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Question 1: Do we want to map the contigs or reads against the reference genomes?
Simone: Yes, I think that this is necessary for a number of things, including identification of core and accessory ge…
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> Following on the plugin use, I couldn’t make the Mobie explorer work like you do in the documentation: the table does not open (headers are for some reason not recognized). Could you confirm that it…