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NF compsets with oslo_aero crashes due to missing soil_erod_files
- NorESM version:NorESM2.5.alpha08
- HPC platform: Betzy
- Compiler (if applicable):
- Compset (if applicable): NF1850
- Res…
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Submit mpi job on HPC Clusters.
bsub -W 6000 -n 8 -o ./out/out.%J -e ./err/err.%J mpiexec -n 8 /share2/zyu9/miniconda/bin/python2.7 HPC_Zhe_norm.py
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I am on an HPC and therefore, I cannot have this accessing the internet. Is there a way for me to be able to create a conda environment or work around considering you have multiple times that your fil…
yr542 updated
2 months ago
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Hi, I use HiFi-human-WGS-WDL on my HPC
The hiphase version is 0.10.2, the error is as follows:
```
thread '' panicked at 'assertion failed: num_alleles >= num_reads', src/writers/phase_stats.rs…
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Port over the EPCC Intro to HPC course from https://github.com/EPCCed/Intro-to-HPC,
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### Describe the bug
We tried running IsaacLab on the L40 and L4 machines using the benchmark script in a Singularity container running Ubuntu 22.04 LTS. We access the Host via a Remote Desktop i.e…
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I've been running cmdstanr a few tens of thousands of times via brms on a HPC node. Something I've noticed is that very rarely, I'll get an error message like
```
! Native call to `processx_exec` …
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Dear tutorial organizers,
I am trying to reproduce the results in [05-dask-hpc.ipynb](https://github.com/NCAR/dask-tutorial/blob/main/notebooks/05-dask-hpc.ipynb) using NCAR HPC JupyterHub on Caspe…
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**Please note, this tutorial has been merged with #2 Accelerating massive data processing in Python with Heat, i.e., both will handled in one full-day tutorial.**
# Title
HPC for Researchers
# …
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- General outline of HPC systems vs Cloud based
- Schedulers and Scheduling
- Filesystems
- Data transfer (the large ones) and Data Management
- Reproducible experiments on HPC (usage of container…