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PacificBiosciences
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HiFi-human-WGS-WDL
BSD 3-Clause Clear License
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hiphase task failed
#171
innerpyg
opened
1 day ago
2
deepvariant task failure
#170
gevro
closed
5 days ago
7
Revert SC1117 fixes that caused issues with miniwdl.
#169
williamrowell
closed
6 days ago
0
v2.0.4 on Terra
#168
gevro
closed
1 week ago
1
Documentation error
#167
gevro
closed
1 week ago
2
Tertiary analysis outputs
#166
gevro
closed
1 week ago
1
paraphase_vcfs question
#165
gevro
closed
1 week ago
1
ref_map bug
#164
gevro
closed
1 week ago
2
Configuration when parents unknown
#163
gevro
closed
1 week ago
4
Output files
#162
gevro
closed
1 week ago
2
New v2 pipeline
#161
gevro
closed
1 week ago
1
phenotypes in input json
#160
gevro
closed
1 week ago
1
write_ped_phrank
#159
gevro
closed
1 week ago
8
New versions > 2.0 question
#158
gevro
closed
1 week ago
1
Adding wdl-ci tests.
#157
williamrowell
closed
5 days ago
0
v2.0.4
#156
williamrowell
closed
1 week ago
0
v2.0.3
#155
williamrowell
closed
1 week ago
0
fix stats file typo
#154
informationsea
closed
1 week ago
1
Fix json2ped.py
#153
williamrowell
closed
2 weeks ago
0
Bugfixes for pbsv_call and write_ped_phrank
#152
williamrowell
closed
2 weeks ago
0
Fixed URL for submodule wdl-common
#151
FelixAntoineLeSieur
closed
2 weeks ago
2
PacBio WGS Variant Pipeline v2.0.0
#150
williamrowell
closed
2 weeks ago
0
Unreachable then clause
#149
adthrasher
closed
3 weeks ago
1
Updated to HiPhase v1.4.4.
#148
williamrowell
closed
2 months ago
0
sawfish
#147
gevro
opened
3 months ago
3
Duplicate IDs in pbsv.phased.vcf.gz
#146
gevro
closed
3 months ago
1
Average genome coverage
#145
gevro
closed
3 months ago
2
Network errors contacting Quay.io
#144
Mo7ammedFarahat
closed
3 months ago
3
OOM (out of memory) for deepvariant_postprocess_variants
#143
Mo7ammedFarahat
closed
3 months ago
2
samtools_reset task?
#142
hudja
closed
3 months ago
1
extract_read_length_and_qual.py: command not found
#141
Mo7ammedFarahat
closed
3 months ago
4
wdl-ci.config.json
#140
Mo7ammedFarahat
closed
4 months ago
1
DeepVariant Model
#139
Giddoo
closed
4 months ago
1
merge_bam_stats.wdl hist scripts
#138
hudja
closed
4 months ago
3
Additional WGS-WDL backends - using Kubernetes
#137
MireiaBN
opened
4 months ago
1
v2 release
#136
williamrowell
closed
2 weeks ago
0
Working on downloaded deepvariant sif file in the miniwdl workflow
#135
priyambial123
closed
4 months ago
1
Removing optional inputs
#134
priyambial123
closed
4 months ago
6
Fix: Tertiary analysis and documentation fixes.
#133
williamrowell
closed
5 months ago
0
Deepvariant files -bcftools stats
#132
priyambial123
closed
5 months ago
1
Fix: Tertiary analysis and documentation fixes.
#131
williamrowell
closed
5 months ago
0
How can miniwdl configure which queue to use for SLURM?
#130
clhappyjiang
closed
5 months ago
1
yaml2ped.py generating ped file with wrong format
#129
ikramu
closed
5 months ago
3
I validated main.wdl using womtool.jar and output a lot of WDL syntax error messages.
#128
clhappyjiang
closed
6 months ago
1
On the issue of container-registry parameter in input data
#127
clhappyjiang
closed
6 months ago
1
Where can I find the source code for multiple. py files used in sample-analysis.wdl and termary-analysis.wdl?
#126
clhappyjiang
closed
6 months ago
1
Package all associated tools into one single docker image
#125
Bin-Guan
closed
6 months ago
6
added the files from wdl-common-fef058b879d04c15c3da2626b320afdd8ace6…
#124
shadizaheri
closed
4 months ago
3
Preparing for version 2
#123
williamrowell
closed
5 months ago
0
The great casing debate community discussion
#122
claymcleod
closed
7 months ago
0
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