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LiuzLab
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AI_MARRVEL
AI-MARRVEL (AIM) is an AI system for rare genetic disorder diagnosis
GNU General Public License v3.0
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refactor handling parameters
#109
hyunhwan-bcm
opened
9 hours ago
0
AIM outputs for all models do not contain transcript and gene IDs/Symbols
#108
Mohammed-Hamdan1
opened
11 hours ago
1
Separate R Dockerfile
#107
jylee-bcm
closed
1 week ago
0
Validate VCF First Before Preprocessing
#106
jylee-bcm
closed
1 week ago
0
Disable LIME analysis as it takes too long time
#105
jylee-bcm
closed
2 weeks ago
0
issue about Prepare HGMD-related data
#104
zhangyuan5422
opened
2 weeks ago
1
Model interpretability
#103
jjia1
closed
2 weeks ago
0
Use Another Dockerhub
#102
jylee-bcm
opened
2 weeks ago
0
Update Scikit Learn to >=1.3.0 and Stop Using predict_new/
#101
jylee-bcm
closed
2 weeks ago
0
hgmd merge_expand data generation
#100
SpicyChicken6
closed
2 weeks ago
0
Adding Model Interpretability
#99
jjia1
closed
2 weeks ago
0
gene_clinvar.csv file wrong version used for hg38
#98
SpicyChicken6
opened
3 weeks ago
0
Support customized black and white list for variants.
#97
zhandong
opened
1 month ago
0
Support customized black and white list for variants
#96
zhandong
opened
1 month ago
0
Version Control on AIM Website
#95
Mohammed-Hamdan1
opened
1 month ago
0
Minimize the metadata of VCF at the beginning of the workflow
#94
jylee-bcm
opened
2 months ago
2
HPO database update
#93
SpicyChicken6
closed
1 month ago
4
HPO database updating
#92
SpicyChicken6
closed
3 weeks ago
3
Export button - frontend
#91
allyssonallan
opened
2 months ago
0
AI MARRVEL HPC Issues - Internet Access Not Allowed
#90
yr542
opened
2 months ago
7
Add sort in normalization
#89
jylee-bcm
closed
2 weeks ago
0
Optimize Output Formatting
#88
hyunhwan-bcm
opened
2 months ago
0
Singularity profile
#87
allyssonallan
closed
2 months ago
9
AWS s3 link not working
#86
allyssonallan
closed
3 months ago
2
Use `storeDir` to generate `net_norm_cor_GEneID.npz`
#85
jylee-bcm
opened
3 months ago
0
merge nextflow_conversion branch to main
#84
hyunhwan-bcm
closed
3 months ago
1
merge nextflow_conversion branch to main
#83
hyunhwan-bcm
closed
3 months ago
0
doc: update S3 URI at installation.rst
#82
arine
closed
3 months ago
1
Add exon-only gri filter script
#81
SpicyChicken6
opened
3 months ago
1
update branch
#80
SpicyChicken6
closed
3 months ago
0
doc: update the documentation link
#79
arine
closed
3 months ago
0
Update README and Version Command
#78
jylee-bcm
closed
3 months ago
0
[NF] Reorganize out directory
#77
jylee-bcm
closed
2 months ago
0
Organize the use of out_dir
#76
jylee-bcm
closed
3 months ago
0
Fix an issue with `--help`
#75
hyunhwan-bcm
closed
3 months ago
0
Revert "Manual update"
#74
hyunhwan-bcm
closed
3 months ago
0
Manual update
#73
hyunhwan-bcm
closed
3 months ago
0
fix empty HPO error.
#72
hyunhwan-bcm
closed
3 months ago
0
Data Sanity Check with Data Directory Structure
#71
jylee-bcm
opened
3 months ago
0
[WIP] Use DVC to check data dependency directory integrity
#70
jylee-bcm
closed
2 weeks ago
0
fix phrank error
#69
hyunhwan-bcm
closed
3 months ago
0
Rename and Regroup Processes More Meaningfully
#68
jylee-bcm
closed
3 months ago
0
Use separate docker container for VEP
#67
jylee-bcm
closed
3 months ago
2
gene filter
#66
SpicyChicken6
closed
3 months ago
1
Clean main.nf
#65
jylee-bcm
closed
3 months ago
4
Use the named output in the workflows
#64
jylee-bcm
closed
3 months ago
1
job separation by chromosome
#63
hyunhwan-bcm
closed
3 months ago
1
Revert "job separation by chromosome"
#62
hyunhwan-bcm
closed
3 months ago
0
Optimize HGMD information search in Feature Engineering Part 1
#61
jylee-bcm
closed
3 months ago
0
Add validation for required inputs types and display error_messages
#60
ZaahidShaik
closed
3 months ago
0
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